Gene : AL1G42570 A. lyrata v2.1

Defline:  (1 of 1) PTHR31587:SF3 - F1K23.6 Genomic Order:  3059
Name:  ? AL1G42570 Secondary Identifier:  ? PAC:35931888

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G42570 0.5kb upstream 0.5kb upstream 2245   true scaffold_1: 12716001-12718245 Arabidopsis lyrata
AL1G42570 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12716001-12716500 Arabidopsis lyrata
AL1G42570 0.5kb downstream 0.5kb downstream 2245   true scaffold_1: 12716501-12718745 Arabidopsis lyrata
AL1G42570 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12718246-12718745 Arabidopsis lyrata
AL1G42570 1.0kb upstream 1.0kb upstream 2745   true scaffold_1: 12715501-12718245 Arabidopsis lyrata
AL1G42570 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12715501-12716500 Arabidopsis lyrata
AL1G42570 1.0kb downstream 1.0kb downstream 2745   true scaffold_1: 12716501-12719245 Arabidopsis lyrata
AL1G42570 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12718246-12719245 Arabidopsis lyrata
AL1G42570 2.0kb upstream 2.0kb upstream 3745   true scaffold_1: 12714501-12718245 Arabidopsis lyrata
AL1G42570 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12714501-12716500 Arabidopsis lyrata
AL1G42570 2.0kb downstream 2.0kb downstream 3745   true scaffold_1: 12716501-12720245 Arabidopsis lyrata
AL1G42570 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12718246-12720245 Arabidopsis lyrata
AL1G42570 5.0kb upstream 5.0kb upstream 6745   true scaffold_1: 12711501-12718245 Arabidopsis lyrata
AL1G42570 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12711501-12716500 Arabidopsis lyrata
AL1G42570 5.0kb downstream 5.0kb downstream 6745   true scaffold_1: 12716501-12723245 Arabidopsis lyrata
AL1G42570 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12718246-12723245 Arabidopsis lyrata
AL1G42570 10.0kb upstream 10.0kb upstream 11745   true scaffold_1: 12706501-12718245 Arabidopsis lyrata
AL1G42570 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12706501-12716500 Arabidopsis lyrata
AL1G42570 10.0kb downstream 10.0kb downstream 11745   true scaffold_1: 12716501-12728245 Arabidopsis lyrata
AL1G42570 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12718246-12728245 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372483 5261 Brassicaceae View MSA
123836367 5264 Brassicales-Malvales View MSA
124339514 5266 SBM View MSA
124238130 5268 Malvidae View MSA
124062319 5270 Rosid View MSA
123746028 5271 Pentapetalae View MSA
122795784 5272 Eudicot View MSA
122046084 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain