Gene : AL1G42980 A. lyrata v2.1
Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  3090
Name:  ? AL1G42980 Secondary Identifier:  ? PAC:35935153
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G42980 0.5kb upstream 0.5kb upstream 2565   true scaffold_1: 12874411-12876975 Arabidopsis lyrata
AL1G42980 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12874411-12874910 Arabidopsis lyrata
AL1G42980 0.5kb downstream 0.5kb downstream 2565   true scaffold_1: 12874911-12877475 Arabidopsis lyrata
AL1G42980 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12876976-12877475 Arabidopsis lyrata
AL1G42980 1.0kb upstream 1.0kb upstream 3065   true scaffold_1: 12873911-12876975 Arabidopsis lyrata
AL1G42980 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12873911-12874910 Arabidopsis lyrata
AL1G42980 1.0kb downstream 1.0kb downstream 3065   true scaffold_1: 12874911-12877975 Arabidopsis lyrata
AL1G42980 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12876976-12877975 Arabidopsis lyrata
AL1G42980 2.0kb upstream 2.0kb upstream 4065   true scaffold_1: 12872911-12876975 Arabidopsis lyrata
AL1G42980 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12872911-12874910 Arabidopsis lyrata
AL1G42980 2.0kb downstream 2.0kb downstream 4065   true scaffold_1: 12874911-12878975 Arabidopsis lyrata
AL1G42980 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12876976-12878975 Arabidopsis lyrata
AL1G42980 5.0kb upstream 5.0kb upstream 7065   true scaffold_1: 12869911-12876975 Arabidopsis lyrata
AL1G42980 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12869911-12874910 Arabidopsis lyrata
AL1G42980 5.0kb downstream 5.0kb downstream 7065   true scaffold_1: 12874911-12881975 Arabidopsis lyrata
AL1G42980 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12876976-12881975 Arabidopsis lyrata
AL1G42980 10.0kb upstream 10.0kb upstream 12065   true scaffold_1: 12864911-12876975 Arabidopsis lyrata
AL1G42980 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12864911-12874910 Arabidopsis lyrata
AL1G42980 10.0kb downstream 10.0kb downstream 12065   true scaffold_1: 12874911-12886975 Arabidopsis lyrata
AL1G42980 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12876976-12886975 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361317 5261 Brassicaceae View MSA
123833240 5264 Brassicales-Malvales View MSA
124338784 5266 SBM View MSA
124250561 5268 Malvidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain