Gene : AL1G41040 A. lyrata v2.1

Defline:  (1 of 2) PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Genomic Order:  2939
Name:  ? AL1G41040 Secondary Identifier:  ? PAC:35932488

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5800 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G41040 0.5kb upstream 0.5kb upstream 3166   true scaffold_1: 12075189-12078354 Arabidopsis lyrata
AL1G41040 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12077855-12078354 Arabidopsis lyrata
AL1G41040 0.5kb downstream 0.5kb downstream 3166   true scaffold_1: 12074689-12077854 Arabidopsis lyrata
AL1G41040 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12074689-12075188 Arabidopsis lyrata
AL1G41040 1.0kb upstream 1.0kb upstream 3666   true scaffold_1: 12075189-12078854 Arabidopsis lyrata
AL1G41040 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12077855-12078854 Arabidopsis lyrata
AL1G41040 1.0kb downstream 1.0kb downstream 3666   true scaffold_1: 12074189-12077854 Arabidopsis lyrata
AL1G41040 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12074189-12075188 Arabidopsis lyrata
AL1G41040 2.0kb upstream 2.0kb upstream 4666   true scaffold_1: 12075189-12079854 Arabidopsis lyrata
AL1G41040 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12077855-12079854 Arabidopsis lyrata
AL1G41040 2.0kb downstream 2.0kb downstream 4666   true scaffold_1: 12073189-12077854 Arabidopsis lyrata
AL1G41040 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12073189-12075188 Arabidopsis lyrata
AL1G41040 5.0kb upstream 5.0kb upstream 7666   true scaffold_1: 12075189-12082854 Arabidopsis lyrata
AL1G41040 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12077855-12082854 Arabidopsis lyrata
AL1G41040 5.0kb downstream 5.0kb downstream 7666   true scaffold_1: 12070189-12077854 Arabidopsis lyrata
AL1G41040 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12070189-12075188 Arabidopsis lyrata
AL1G41040 10.0kb upstream 10.0kb upstream 12666   true scaffold_1: 12075189-12087854 Arabidopsis lyrata
AL1G41040 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12077855-12087854 Arabidopsis lyrata
AL1G41040 10.0kb downstream 10.0kb downstream 12666   true scaffold_1: 12065189-12077854 Arabidopsis lyrata
AL1G41040 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12065189-12075188 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372036 5261 Brassicaceae View MSA
123829851 5264 Brassicales-Malvales View MSA
124351012 5266 SBM View MSA
124252838 5268 Malvidae View MSA
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain