Gene : AL1G41460 A. lyrata v2.1

Defline:  (1 of 2) PTHR12612 - NUCLEAR TRANSPORT FACTOR 2 Genomic Order:  2978
Name:  ? AL1G41460 Secondary Identifier:  ? PAC:35932931

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G41460 0.5kb upstream 0.5kb upstream 1876   true scaffold_1: 12276351-12278226 Arabidopsis lyrata
AL1G41460 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12276351-12276850 Arabidopsis lyrata
AL1G41460 0.5kb downstream 0.5kb downstream 1876   true scaffold_1: 12276851-12278726 Arabidopsis lyrata
AL1G41460 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12278227-12278726 Arabidopsis lyrata
AL1G41460 1.0kb upstream 1.0kb upstream 2376   true scaffold_1: 12275851-12278226 Arabidopsis lyrata
AL1G41460 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12275851-12276850 Arabidopsis lyrata
AL1G41460 1.0kb downstream 1.0kb downstream 2376   true scaffold_1: 12276851-12279226 Arabidopsis lyrata
AL1G41460 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12278227-12279226 Arabidopsis lyrata
AL1G41460 2.0kb upstream 2.0kb upstream 3376   true scaffold_1: 12274851-12278226 Arabidopsis lyrata
AL1G41460 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12274851-12276850 Arabidopsis lyrata
AL1G41460 2.0kb downstream 2.0kb downstream 3376   true scaffold_1: 12276851-12280226 Arabidopsis lyrata
AL1G41460 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12278227-12280226 Arabidopsis lyrata
AL1G41460 5.0kb upstream 5.0kb upstream 6376   true scaffold_1: 12271851-12278226 Arabidopsis lyrata
AL1G41460 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12271851-12276850 Arabidopsis lyrata
AL1G41460 5.0kb downstream 5.0kb downstream 6376   true scaffold_1: 12276851-12283226 Arabidopsis lyrata
AL1G41460 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12278227-12283226 Arabidopsis lyrata
AL1G41460 10.0kb upstream 10.0kb upstream 11376   true scaffold_1: 12266851-12278226 Arabidopsis lyrata
AL1G41460 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12266851-12276850 Arabidopsis lyrata
AL1G41460 10.0kb downstream 10.0kb downstream 11376   true scaffold_1: 12276851-12288226 Arabidopsis lyrata
AL1G41460 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12278227-12288226 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362277 5261 Brassicaceae View MSA
123838890 5264 Brassicales-Malvales View MSA
124346465 5266 SBM View MSA
124239660 5268 Malvidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain