Gene : AL1G40470 A. lyrata v2.1

Defline:  (1 of 2) K10251 - 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase (HSD17B12, KAR, IFA38) Genomic Order:  2882
Name:  ? AL1G40470 Secondary Identifier:  ? PAC:35935370

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40470 0.5kb upstream 0.5kb upstream 2942   true scaffold_1: 11850184-11853125 Arabidopsis lyrata
AL1G40470 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11852626-11853125 Arabidopsis lyrata
AL1G40470 0.5kb downstream 0.5kb downstream 2942   true scaffold_1: 11849684-11852625 Arabidopsis lyrata
AL1G40470 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11849684-11850183 Arabidopsis lyrata
AL1G40470 1.0kb upstream 1.0kb upstream 3442   true scaffold_1: 11850184-11853625 Arabidopsis lyrata
AL1G40470 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11852626-11853625 Arabidopsis lyrata
AL1G40470 1.0kb downstream 1.0kb downstream 3442   true scaffold_1: 11849184-11852625 Arabidopsis lyrata
AL1G40470 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11849184-11850183 Arabidopsis lyrata
AL1G40470 2.0kb upstream 2.0kb upstream 4442   true scaffold_1: 11850184-11854625 Arabidopsis lyrata
AL1G40470 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11852626-11854625 Arabidopsis lyrata
AL1G40470 2.0kb downstream 2.0kb downstream 4442   true scaffold_1: 11848184-11852625 Arabidopsis lyrata
AL1G40470 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11848184-11850183 Arabidopsis lyrata
AL1G40470 5.0kb upstream 5.0kb upstream 7442   true scaffold_1: 11850184-11857625 Arabidopsis lyrata
AL1G40470 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11852626-11857625 Arabidopsis lyrata
AL1G40470 5.0kb downstream 5.0kb downstream 7442   true scaffold_1: 11845184-11852625 Arabidopsis lyrata
AL1G40470 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11845184-11850183 Arabidopsis lyrata
AL1G40470 10.0kb upstream 10.0kb upstream 12442   true scaffold_1: 11850184-11862625 Arabidopsis lyrata
AL1G40470 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11852626-11862625 Arabidopsis lyrata
AL1G40470 10.0kb downstream 10.0kb downstream 12442   true scaffold_1: 11840184-11852625 Arabidopsis lyrata
AL1G40470 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11840184-11850183 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363619 5261 Brassicaceae View MSA
123830884 5264 Brassicales-Malvales View MSA
124343782 5266 SBM View MSA
124240925 5268 Malvidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain