Gene : AL1G40560 A. lyrata v2.1

Defline:  (1 of 1) KOG1200 - Mitochondrial/plastidial beta-ketoacyl-ACP reductase Genomic Order:  2891
Name:  ? AL1G40560 Secondary Identifier:  ? PAC:35931602

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata FASYN-ELONG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-5971 Arabidopsis lyrata pathologic  
Alyrata PWY-5973 Arabidopsis lyrata pathologic  
Alyrata PWY-5989 Arabidopsis lyrata pathologic  
Alyrata PWY-6282 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  
Alyrata PWY-7663 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40560 0.5kb upstream 0.5kb upstream 3402   true scaffold_1: 11885574-11888975 Arabidopsis lyrata
AL1G40560 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11888476-11888975 Arabidopsis lyrata
AL1G40560 0.5kb downstream 0.5kb downstream 3402   true scaffold_1: 11885074-11888475 Arabidopsis lyrata
AL1G40560 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11885074-11885573 Arabidopsis lyrata
AL1G40560 1.0kb upstream 1.0kb upstream 3902   true scaffold_1: 11885574-11889475 Arabidopsis lyrata
AL1G40560 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11888476-11889475 Arabidopsis lyrata
AL1G40560 1.0kb downstream 1.0kb downstream 3902   true scaffold_1: 11884574-11888475 Arabidopsis lyrata
AL1G40560 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11884574-11885573 Arabidopsis lyrata
AL1G40560 2.0kb upstream 2.0kb upstream 4902   true scaffold_1: 11885574-11890475 Arabidopsis lyrata
AL1G40560 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11888476-11890475 Arabidopsis lyrata
AL1G40560 2.0kb downstream 2.0kb downstream 4902   true scaffold_1: 11883574-11888475 Arabidopsis lyrata
AL1G40560 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11883574-11885573 Arabidopsis lyrata
AL1G40560 5.0kb upstream 5.0kb upstream 7902   true scaffold_1: 11885574-11893475 Arabidopsis lyrata
AL1G40560 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11888476-11893475 Arabidopsis lyrata
AL1G40560 5.0kb downstream 5.0kb downstream 7902   true scaffold_1: 11880574-11888475 Arabidopsis lyrata
AL1G40560 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11880574-11885573 Arabidopsis lyrata
AL1G40560 10.0kb upstream 10.0kb upstream 12902   true scaffold_1: 11885574-11898475 Arabidopsis lyrata
AL1G40560 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11888476-11898475 Arabidopsis lyrata
AL1G40560 10.0kb downstream 10.0kb downstream 12902   true scaffold_1: 11875574-11888475 Arabidopsis lyrata
AL1G40560 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11875574-11885573 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371624 5261 Brassicaceae View MSA
123829901 5264 Brassicales-Malvales View MSA
124338010 5266 SBM View MSA
124239071 5268 Malvidae View MSA
124071251 5270 Rosid View MSA
123740776 5271 Pentapetalae View MSA
122787296 5272 Eudicot View MSA
122042809 5273 Angiosperm View MSA
121347149 5274 Embryophyte View MSA
123428494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain