Gene : AL1G40940 A. lyrata v2.1

Defline:  (1 of 2) PF12014 - Domain of unknown function (DUF3506) (DUF3506) Genomic Order:  2929
Name:  ? AL1G40940 Secondary Identifier:  ? PAC:35932613

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40940 0.5kb upstream 0.5kb upstream 4198   true scaffold_1: 12031817-12036014 Arabidopsis lyrata
AL1G40940 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12035515-12036014 Arabidopsis lyrata
AL1G40940 0.5kb downstream 0.5kb downstream 4198   true scaffold_1: 12031317-12035514 Arabidopsis lyrata
AL1G40940 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12031317-12031816 Arabidopsis lyrata
AL1G40940 1.0kb upstream 1.0kb upstream 4698   true scaffold_1: 12031817-12036514 Arabidopsis lyrata
AL1G40940 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12035515-12036514 Arabidopsis lyrata
AL1G40940 1.0kb downstream 1.0kb downstream 4698   true scaffold_1: 12030817-12035514 Arabidopsis lyrata
AL1G40940 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12030817-12031816 Arabidopsis lyrata
AL1G40940 2.0kb upstream 2.0kb upstream 5698   true scaffold_1: 12031817-12037514 Arabidopsis lyrata
AL1G40940 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12035515-12037514 Arabidopsis lyrata
AL1G40940 2.0kb downstream 2.0kb downstream 5698   true scaffold_1: 12029817-12035514 Arabidopsis lyrata
AL1G40940 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12029817-12031816 Arabidopsis lyrata
AL1G40940 5.0kb upstream 5.0kb upstream 8698   true scaffold_1: 12031817-12040514 Arabidopsis lyrata
AL1G40940 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12035515-12040514 Arabidopsis lyrata
AL1G40940 5.0kb downstream 5.0kb downstream 8698   true scaffold_1: 12026817-12035514 Arabidopsis lyrata
AL1G40940 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12026817-12031816 Arabidopsis lyrata
AL1G40940 10.0kb upstream 10.0kb upstream 13698   true scaffold_1: 12031817-12045514 Arabidopsis lyrata
AL1G40940 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12035515-12045514 Arabidopsis lyrata
AL1G40940 10.0kb downstream 10.0kb downstream 13698   true scaffold_1: 12021817-12035514 Arabidopsis lyrata
AL1G40940 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12021817-12031816 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374051 5261 Brassicaceae View MSA
123832099 5264 Brassicales-Malvales View MSA
124339550 5266 SBM View MSA
124239202 5268 Malvidae View MSA
124067530 5270 Rosid View MSA
123737338 5271 Pentapetalae View MSA
122786783 5272 Eudicot View MSA
122043193 5273 Angiosperm View MSA
121347827 5274 Embryophyte View MSA
123425558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain