Gene : AL1G44540 A. lyrata v2.1

Defline:  (1 of 3) K02641 - ferredoxin--NADP+ reductase (petH) Genomic Order:  3236
Name:  ? AL1G44540 Secondary Identifier:  ? PAC:35933664

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G44540 0.5kb upstream 0.5kb upstream 2646   true scaffold_1: 13702598-13705243 Arabidopsis lyrata
AL1G44540 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 13704744-13705243 Arabidopsis lyrata
AL1G44540 0.5kb downstream 0.5kb downstream 2646   true scaffold_1: 13702098-13704743 Arabidopsis lyrata
AL1G44540 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 13702098-13702597 Arabidopsis lyrata
AL1G44540 1.0kb upstream 1.0kb upstream 3146   true scaffold_1: 13702598-13705743 Arabidopsis lyrata
AL1G44540 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 13704744-13705743 Arabidopsis lyrata
AL1G44540 1.0kb downstream 1.0kb downstream 3146   true scaffold_1: 13701598-13704743 Arabidopsis lyrata
AL1G44540 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 13701598-13702597 Arabidopsis lyrata
AL1G44540 2.0kb upstream 2.0kb upstream 4146   true scaffold_1: 13702598-13706743 Arabidopsis lyrata
AL1G44540 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 13704744-13706743 Arabidopsis lyrata
AL1G44540 2.0kb downstream 2.0kb downstream 4146   true scaffold_1: 13700598-13704743 Arabidopsis lyrata
AL1G44540 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 13700598-13702597 Arabidopsis lyrata
AL1G44540 5.0kb upstream 5.0kb upstream 7146   true scaffold_1: 13702598-13709743 Arabidopsis lyrata
AL1G44540 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 13704744-13709743 Arabidopsis lyrata
AL1G44540 5.0kb downstream 5.0kb downstream 7146   true scaffold_1: 13697598-13704743 Arabidopsis lyrata
AL1G44540 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 13697598-13702597 Arabidopsis lyrata
AL1G44540 10.0kb upstream 10.0kb upstream 12146   true scaffold_1: 13702598-13714743 Arabidopsis lyrata
AL1G44540 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 13704744-13714743 Arabidopsis lyrata
AL1G44540 10.0kb downstream 10.0kb downstream 12146   true scaffold_1: 13692598-13704743 Arabidopsis lyrata
AL1G44540 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 13692598-13702597 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
122363969 5261 Brassicaceae View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain