Gene : AL1G44320 A. lyrata v2.1

Defline:  (1 of 1) K02698 - photosystem I subunit X (psaK) Genomic Order:  3217
Name:  ? AL1G44320 Secondary Identifier:  ? PAC:35935343

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G44320 0.5kb upstream 0.5kb upstream 1439   true scaffold_1: 13531750-13533188 Arabidopsis lyrata
AL1G44320 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 13531750-13532249 Arabidopsis lyrata
AL1G44320 0.5kb downstream 0.5kb downstream 1439   true scaffold_1: 13532250-13533688 Arabidopsis lyrata
AL1G44320 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 13533189-13533688 Arabidopsis lyrata
AL1G44320 1.0kb upstream 1.0kb upstream 1939   true scaffold_1: 13531250-13533188 Arabidopsis lyrata
AL1G44320 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 13531250-13532249 Arabidopsis lyrata
AL1G44320 1.0kb downstream 1.0kb downstream 1939   true scaffold_1: 13532250-13534188 Arabidopsis lyrata
AL1G44320 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 13533189-13534188 Arabidopsis lyrata
AL1G44320 2.0kb upstream 2.0kb upstream 2939   true scaffold_1: 13530250-13533188 Arabidopsis lyrata
AL1G44320 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 13530250-13532249 Arabidopsis lyrata
AL1G44320 2.0kb downstream 2.0kb downstream 2939   true scaffold_1: 13532250-13535188 Arabidopsis lyrata
AL1G44320 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 13533189-13535188 Arabidopsis lyrata
AL1G44320 5.0kb upstream 5.0kb upstream 5939   true scaffold_1: 13527250-13533188 Arabidopsis lyrata
AL1G44320 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 13527250-13532249 Arabidopsis lyrata
AL1G44320 5.0kb downstream 5.0kb downstream 5939   true scaffold_1: 13532250-13538188 Arabidopsis lyrata
AL1G44320 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 13533189-13538188 Arabidopsis lyrata
AL1G44320 10.0kb upstream 10.0kb upstream 10939   true scaffold_1: 13522250-13533188 Arabidopsis lyrata
AL1G44320 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 13522250-13532249 Arabidopsis lyrata
AL1G44320 10.0kb downstream 10.0kb downstream 10939   true scaffold_1: 13532250-13543188 Arabidopsis lyrata
AL1G44320 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 13533189-13543188 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378578 5261 Brassicaceae View MSA
123833502 5264 Brassicales-Malvales View MSA
124342197 5266 SBM View MSA
124242965 5268 Malvidae View MSA
124064022 5270 Rosid View MSA
123739111 5271 Pentapetalae View MSA
122786435 5272 Eudicot View MSA
122044551 5273 Angiosperm View MSA
121347312 5274 Embryophyte View MSA
123425033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain