Gene : AL1G43200 A. lyrata v2.1
Defline:  (1 of 6) PF00076//PF04059 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif 2 (RRM_2) Genomic Order:  3107
Name:  ? AL1G43200 Secondary Identifier:  ? PAC:35935612
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G43200 0.5kb upstream 0.5kb upstream 5114   true scaffold_1: 12969633-12974746 Arabidopsis lyrata
AL1G43200 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 12974247-12974746 Arabidopsis lyrata
AL1G43200 0.5kb downstream 0.5kb downstream 5114   true scaffold_1: 12969133-12974246 Arabidopsis lyrata
AL1G43200 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 12969133-12969632 Arabidopsis lyrata
AL1G43200 1.0kb upstream 1.0kb upstream 5614   true scaffold_1: 12969633-12975246 Arabidopsis lyrata
AL1G43200 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 12974247-12975246 Arabidopsis lyrata
AL1G43200 1.0kb downstream 1.0kb downstream 5614   true scaffold_1: 12968633-12974246 Arabidopsis lyrata
AL1G43200 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 12968633-12969632 Arabidopsis lyrata
AL1G43200 2.0kb upstream 2.0kb upstream 6614   true scaffold_1: 12969633-12976246 Arabidopsis lyrata
AL1G43200 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 12974247-12976246 Arabidopsis lyrata
AL1G43200 2.0kb downstream 2.0kb downstream 6614   true scaffold_1: 12967633-12974246 Arabidopsis lyrata
AL1G43200 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 12967633-12969632 Arabidopsis lyrata
AL1G43200 5.0kb upstream 5.0kb upstream 9614   true scaffold_1: 12969633-12979246 Arabidopsis lyrata
AL1G43200 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 12974247-12979246 Arabidopsis lyrata
AL1G43200 5.0kb downstream 5.0kb downstream 9614   true scaffold_1: 12964633-12974246 Arabidopsis lyrata
AL1G43200 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 12964633-12969632 Arabidopsis lyrata
AL1G43200 10.0kb upstream 10.0kb upstream 14614   true scaffold_1: 12969633-12984246 Arabidopsis lyrata
AL1G43200 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 12974247-12984246 Arabidopsis lyrata
AL1G43200 10.0kb downstream 10.0kb downstream 14614   true scaffold_1: 12959633-12974246 Arabidopsis lyrata
AL1G43200 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 12959633-12969632 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367116 5261 Brassicaceae View MSA
123829432 5264 Brassicales-Malvales View MSA
124339733 5266 SBM View MSA
124245792 5268 Malvidae View MSA
124070697 5270 Rosid View MSA
123742747 5271 Pentapetalae View MSA
122790656 5272 Eudicot View MSA
122046882 5273 Angiosperm View MSA
121349156 5274 Embryophyte View MSA
123428382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain