Gene : AL1G43620 A. lyrata v2.1

Genomic Order:  3149 Name:  ? AL1G43620
Secondary Identifier:  ? PAC:35933881

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G43620 0.5kb upstream 0.5kb upstream 1209   true scaffold_1: 13130473-13131681 Arabidopsis lyrata
AL1G43620 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 13131182-13131681 Arabidopsis lyrata
AL1G43620 0.5kb downstream 0.5kb downstream 1209   true scaffold_1: 13129973-13131181 Arabidopsis lyrata
AL1G43620 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 13129973-13130472 Arabidopsis lyrata
AL1G43620 1.0kb upstream 1.0kb upstream 1709   true scaffold_1: 13130473-13132181 Arabidopsis lyrata
AL1G43620 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 13131182-13132181 Arabidopsis lyrata
AL1G43620 1.0kb downstream 1.0kb downstream 1709   true scaffold_1: 13129473-13131181 Arabidopsis lyrata
AL1G43620 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 13129473-13130472 Arabidopsis lyrata
AL1G43620 2.0kb upstream 2.0kb upstream 2709   true scaffold_1: 13130473-13133181 Arabidopsis lyrata
AL1G43620 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 13131182-13133181 Arabidopsis lyrata
AL1G43620 2.0kb downstream 2.0kb downstream 2709   true scaffold_1: 13128473-13131181 Arabidopsis lyrata
AL1G43620 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 13128473-13130472 Arabidopsis lyrata
AL1G43620 5.0kb upstream 5.0kb upstream 5709   true scaffold_1: 13130473-13136181 Arabidopsis lyrata
AL1G43620 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 13131182-13136181 Arabidopsis lyrata
AL1G43620 5.0kb downstream 5.0kb downstream 5709   true scaffold_1: 13125473-13131181 Arabidopsis lyrata
AL1G43620 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 13125473-13130472 Arabidopsis lyrata
AL1G43620 10.0kb upstream 10.0kb upstream 10709   true scaffold_1: 13130473-13141181 Arabidopsis lyrata
AL1G43620 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 13131182-13141181 Arabidopsis lyrata
AL1G43620 10.0kb downstream 10.0kb downstream 10709   true scaffold_1: 13120473-13131181 Arabidopsis lyrata
AL1G43620 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 13120473-13130472 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373660 5261 Brassicaceae View MSA
123827967 5264 Brassicales-Malvales View MSA
124347946 5266 SBM View MSA
124240254 5268 Malvidae View MSA
124073274 5270 Rosid View MSA
123746985 5271 Pentapetalae View MSA
122772073 5272 Eudicot View MSA
122048544 5273 Angiosperm View MSA
121311015 5274 Embryophyte View MSA
123348373 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain