Gene : AL1G47780 A. lyrata v2.1
Defline:  (1 of 3) PTHR12197:SF173 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  3522
Name:  ? AL1G47780 Secondary Identifier:  ? PAC:35930997
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G47780 0.5kb upstream 0.5kb upstream 5261   true scaffold_1: 15456837-15462097 Arabidopsis lyrata
AL1G47780 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 15461598-15462097 Arabidopsis lyrata
AL1G47780 0.5kb downstream 0.5kb downstream 5261   true scaffold_1: 15456337-15461597 Arabidopsis lyrata
AL1G47780 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 15456337-15456836 Arabidopsis lyrata
AL1G47780 1.0kb upstream 1.0kb upstream 5761   true scaffold_1: 15456837-15462597 Arabidopsis lyrata
AL1G47780 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 15461598-15462597 Arabidopsis lyrata
AL1G47780 1.0kb downstream 1.0kb downstream 5761   true scaffold_1: 15455837-15461597 Arabidopsis lyrata
AL1G47780 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 15455837-15456836 Arabidopsis lyrata
AL1G47780 2.0kb upstream 2.0kb upstream 6761   true scaffold_1: 15456837-15463597 Arabidopsis lyrata
AL1G47780 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 15461598-15463597 Arabidopsis lyrata
AL1G47780 2.0kb downstream 2.0kb downstream 6761   true scaffold_1: 15454837-15461597 Arabidopsis lyrata
AL1G47780 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 15454837-15456836 Arabidopsis lyrata
AL1G47780 5.0kb upstream 5.0kb upstream 9761   true scaffold_1: 15456837-15466597 Arabidopsis lyrata
AL1G47780 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 15461598-15466597 Arabidopsis lyrata
AL1G47780 5.0kb downstream 5.0kb downstream 9761   true scaffold_1: 15451837-15461597 Arabidopsis lyrata
AL1G47780 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 15451837-15456836 Arabidopsis lyrata
AL1G47780 10.0kb upstream 10.0kb upstream 14761   true scaffold_1: 15456837-15471597 Arabidopsis lyrata
AL1G47780 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 15461598-15471597 Arabidopsis lyrata
AL1G47780 10.0kb downstream 10.0kb downstream 14761   true scaffold_1: 15446837-15461597 Arabidopsis lyrata
AL1G47780 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 15446837-15456836 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371990 5261 Brassicaceae View MSA
123832635 5264 Brassicales-Malvales View MSA
124343493 5266 SBM View MSA
124252050 5268 Malvidae View MSA
124072039 5270 Rosid View MSA
123748863 5271 Pentapetalae View MSA
122787018 5272 Eudicot View MSA
122047928 5273 Angiosperm View MSA
121346419 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain