Gene : AL1G47790 A. lyrata v2.1
Defline:  (1 of 1) K14303 - nuclear pore complex protein Nup160 (NUP160, NUP120) Genomic Order:  3523
Name:  ? AL1G47790 Secondary Identifier:  ? PAC:35931867
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G47790 0.5kb upstream 0.5kb upstream 9889   true scaffold_1: 15461769-15471657 Arabidopsis lyrata
AL1G47790 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 15471158-15471657 Arabidopsis lyrata
AL1G47790 0.5kb downstream 0.5kb downstream 9889   true scaffold_1: 15461269-15471157 Arabidopsis lyrata
AL1G47790 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 15461269-15461768 Arabidopsis lyrata
AL1G47790 1.0kb upstream 1.0kb upstream 10389   true scaffold_1: 15461769-15472157 Arabidopsis lyrata
AL1G47790 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 15471158-15472157 Arabidopsis lyrata
AL1G47790 1.0kb downstream 1.0kb downstream 10389   true scaffold_1: 15460769-15471157 Arabidopsis lyrata
AL1G47790 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 15460769-15461768 Arabidopsis lyrata
AL1G47790 2.0kb upstream 2.0kb upstream 11389   true scaffold_1: 15461769-15473157 Arabidopsis lyrata
AL1G47790 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 15471158-15473157 Arabidopsis lyrata
AL1G47790 2.0kb downstream 2.0kb downstream 11389   true scaffold_1: 15459769-15471157 Arabidopsis lyrata
AL1G47790 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 15459769-15461768 Arabidopsis lyrata
AL1G47790 5.0kb upstream 5.0kb upstream 14389   true scaffold_1: 15461769-15476157 Arabidopsis lyrata
AL1G47790 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 15471158-15476157 Arabidopsis lyrata
AL1G47790 5.0kb downstream 5.0kb downstream 14389   true scaffold_1: 15456769-15471157 Arabidopsis lyrata
AL1G47790 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 15456769-15461768 Arabidopsis lyrata
AL1G47790 10.0kb upstream 10.0kb upstream 19389   true scaffold_1: 15461769-15481157 Arabidopsis lyrata
AL1G47790 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 15471158-15481157 Arabidopsis lyrata
AL1G47790 10.0kb downstream 10.0kb downstream 19389   true scaffold_1: 15451769-15471157 Arabidopsis lyrata
AL1G47790 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 15451769-15461768 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362970 5261 Brassicaceae View MSA
123829341 5264 Brassicales-Malvales View MSA
124337643 5266 SBM View MSA
124238753 5268 Malvidae View MSA
124050193 5270 Rosid View MSA
123749967 5271 Pentapetalae View MSA
122790000 5272 Eudicot View MSA
122043780 5273 Angiosperm View MSA
121346160 5274 Embryophyte View MSA
123425689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain