Gene : AL1G47190 A. lyrata v2.1

Defline:  (1 of 3) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  3469
Name:  ? AL1G47190 Secondary Identifier:  ? PAC:35930937

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4203 Arabidopsis lyrata pathologic  
Alyrata PWY-5835 Arabidopsis lyrata pathologic  
Alyrata PWY-6801 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G47190 0.5kb upstream 0.5kb upstream 2193   true scaffold_1: 15183097-15185289 Arabidopsis lyrata
AL1G47190 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 15183097-15183596 Arabidopsis lyrata
AL1G47190 0.5kb downstream 0.5kb downstream 2193   true scaffold_1: 15183597-15185789 Arabidopsis lyrata
AL1G47190 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 15185290-15185789 Arabidopsis lyrata
AL1G47190 1.0kb upstream 1.0kb upstream 2693   true scaffold_1: 15182597-15185289 Arabidopsis lyrata
AL1G47190 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 15182597-15183596 Arabidopsis lyrata
AL1G47190 1.0kb downstream 1.0kb downstream 2693   true scaffold_1: 15183597-15186289 Arabidopsis lyrata
AL1G47190 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 15185290-15186289 Arabidopsis lyrata
AL1G47190 2.0kb upstream 2.0kb upstream 3693   true scaffold_1: 15181597-15185289 Arabidopsis lyrata
AL1G47190 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 15181597-15183596 Arabidopsis lyrata
AL1G47190 2.0kb downstream 2.0kb downstream 3693   true scaffold_1: 15183597-15187289 Arabidopsis lyrata
AL1G47190 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 15185290-15187289 Arabidopsis lyrata
AL1G47190 5.0kb upstream 5.0kb upstream 6693   true scaffold_1: 15178597-15185289 Arabidopsis lyrata
AL1G47190 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 15178597-15183596 Arabidopsis lyrata
AL1G47190 5.0kb downstream 5.0kb downstream 6693   true scaffold_1: 15183597-15190289 Arabidopsis lyrata
AL1G47190 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 15185290-15190289 Arabidopsis lyrata
AL1G47190 10.0kb upstream 10.0kb upstream 11693   true scaffold_1: 15173597-15185289 Arabidopsis lyrata
AL1G47190 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 15173597-15183596 Arabidopsis lyrata
AL1G47190 10.0kb downstream 10.0kb downstream 11693   true scaffold_1: 15183597-15195289 Arabidopsis lyrata
AL1G47190 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 15185290-15195289 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344173 5261 Brassicaceae View MSA
123784214 5264 Brassicales-Malvales View MSA
124282410 5266 SBM View MSA
124247936 5268 Malvidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain