Gene : AL1G47180 A. lyrata v2.1

Defline:  (1 of 1) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  3468
Name:  ? AL1G47180 Secondary Identifier:  ? PAC:35935701

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-622 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G47180 0.5kb upstream 0.5kb upstream 3748   true scaffold_1: 15176635-15180382 Arabidopsis lyrata
AL1G47180 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 15179883-15180382 Arabidopsis lyrata
AL1G47180 0.5kb downstream 0.5kb downstream 3748   true scaffold_1: 15176135-15179882 Arabidopsis lyrata
AL1G47180 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 15176135-15176634 Arabidopsis lyrata
AL1G47180 1.0kb upstream 1.0kb upstream 4248   true scaffold_1: 15176635-15180882 Arabidopsis lyrata
AL1G47180 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 15179883-15180882 Arabidopsis lyrata
AL1G47180 1.0kb downstream 1.0kb downstream 4248   true scaffold_1: 15175635-15179882 Arabidopsis lyrata
AL1G47180 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 15175635-15176634 Arabidopsis lyrata
AL1G47180 2.0kb upstream 2.0kb upstream 5248   true scaffold_1: 15176635-15181882 Arabidopsis lyrata
AL1G47180 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 15179883-15181882 Arabidopsis lyrata
AL1G47180 2.0kb downstream 2.0kb downstream 5248   true scaffold_1: 15174635-15179882 Arabidopsis lyrata
AL1G47180 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 15174635-15176634 Arabidopsis lyrata
AL1G47180 5.0kb upstream 5.0kb upstream 8248   true scaffold_1: 15176635-15184882 Arabidopsis lyrata
AL1G47180 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 15179883-15184882 Arabidopsis lyrata
AL1G47180 5.0kb downstream 5.0kb downstream 8248   true scaffold_1: 15171635-15179882 Arabidopsis lyrata
AL1G47180 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 15171635-15176634 Arabidopsis lyrata
AL1G47180 10.0kb upstream 10.0kb upstream 13248   true scaffold_1: 15176635-15189882 Arabidopsis lyrata
AL1G47180 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 15179883-15189882 Arabidopsis lyrata
AL1G47180 10.0kb downstream 10.0kb downstream 13248   true scaffold_1: 15166635-15179882 Arabidopsis lyrata
AL1G47180 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 15166635-15176634 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374165 5261 Brassicaceae View MSA
123836370 5264 Brassicales-Malvales View MSA
124336942 5266 SBM View MSA
124254033 5268 Malvidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain