Gene : AL1G45980 A. lyrata v2.1

Defline:  (1 of 3) PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  3365
Name:  ? AL1G45980 Secondary Identifier:  ? PAC:35932258

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G45980 0.5kb upstream 0.5kb upstream 5126   true scaffold_1: 14477844-14482969 Arabidopsis lyrata
AL1G45980 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 14477844-14478343 Arabidopsis lyrata
AL1G45980 0.5kb downstream 0.5kb downstream 5126   true scaffold_1: 14478344-14483469 Arabidopsis lyrata
AL1G45980 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14482970-14483469 Arabidopsis lyrata
AL1G45980 1.0kb upstream 1.0kb upstream 5626   true scaffold_1: 14477344-14482969 Arabidopsis lyrata
AL1G45980 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 14477344-14478343 Arabidopsis lyrata
AL1G45980 1.0kb downstream 1.0kb downstream 5626   true scaffold_1: 14478344-14483969 Arabidopsis lyrata
AL1G45980 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14482970-14483969 Arabidopsis lyrata
AL1G45980 2.0kb upstream 2.0kb upstream 6626   true scaffold_1: 14476344-14482969 Arabidopsis lyrata
AL1G45980 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 14476344-14478343 Arabidopsis lyrata
AL1G45980 2.0kb downstream 2.0kb downstream 6626   true scaffold_1: 14478344-14484969 Arabidopsis lyrata
AL1G45980 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 14482970-14484969 Arabidopsis lyrata
AL1G45980 5.0kb upstream 5.0kb upstream 9626   true scaffold_1: 14473344-14482969 Arabidopsis lyrata
AL1G45980 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 14473344-14478343 Arabidopsis lyrata
AL1G45980 5.0kb downstream 5.0kb downstream 9626   true scaffold_1: 14478344-14487969 Arabidopsis lyrata
AL1G45980 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 14482970-14487969 Arabidopsis lyrata
AL1G45980 10.0kb upstream 10.0kb upstream 14626   true scaffold_1: 14468344-14482969 Arabidopsis lyrata
AL1G45980 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 14468344-14478343 Arabidopsis lyrata
AL1G45980 10.0kb downstream 10.0kb downstream 14626   true scaffold_1: 14478344-14492969 Arabidopsis lyrata
AL1G45980 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 14482970-14492969 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364357 5261 Brassicaceae View MSA
123834222 5264 Brassicales-Malvales View MSA
124350044 5266 SBM View MSA
124249794 5268 Malvidae View MSA
124062514 5270 Rosid View MSA
123739591 5271 Pentapetalae View MSA
122790552 5272 Eudicot View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain