Gene : AL1G45960 A. lyrata v2.1

Defline:  (1 of 1) 3.5.4.19 - Phosphoribosyl-AMP cyclohydrolase Genomic Order:  3363
Name:  ? AL1G45960 Secondary Identifier:  ? PAC:35932915

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata HISTSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G45960 0.5kb upstream 0.5kb upstream 3065   true scaffold_1: 14465791-14468855 Arabidopsis lyrata
AL1G45960 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 14468356-14468855 Arabidopsis lyrata
AL1G45960 0.5kb downstream 0.5kb downstream 3065   true scaffold_1: 14465291-14468355 Arabidopsis lyrata
AL1G45960 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14465291-14465790 Arabidopsis lyrata
AL1G45960 1.0kb upstream 1.0kb upstream 3565   true scaffold_1: 14465791-14469355 Arabidopsis lyrata
AL1G45960 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 14468356-14469355 Arabidopsis lyrata
AL1G45960 1.0kb downstream 1.0kb downstream 3565   true scaffold_1: 14464791-14468355 Arabidopsis lyrata
AL1G45960 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14464791-14465790 Arabidopsis lyrata
AL1G45960 2.0kb upstream 2.0kb upstream 4565   true scaffold_1: 14465791-14470355 Arabidopsis lyrata
AL1G45960 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 14468356-14470355 Arabidopsis lyrata
AL1G45960 2.0kb downstream 2.0kb downstream 4565   true scaffold_1: 14463791-14468355 Arabidopsis lyrata
AL1G45960 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 14463791-14465790 Arabidopsis lyrata
AL1G45960 5.0kb upstream 5.0kb upstream 7565   true scaffold_1: 14465791-14473355 Arabidopsis lyrata
AL1G45960 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 14468356-14473355 Arabidopsis lyrata
AL1G45960 5.0kb downstream 5.0kb downstream 7565   true scaffold_1: 14460791-14468355 Arabidopsis lyrata
AL1G45960 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 14460791-14465790 Arabidopsis lyrata
AL1G45960 10.0kb upstream 10.0kb upstream 12565   true scaffold_1: 14465791-14478355 Arabidopsis lyrata
AL1G45960 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 14468356-14478355 Arabidopsis lyrata
AL1G45960 10.0kb downstream 10.0kb downstream 12565   true scaffold_1: 14455791-14468355 Arabidopsis lyrata
AL1G45960 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 14455791-14465790 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373728 5261 Brassicaceae View MSA
123839923 5264 Brassicales-Malvales View MSA
124337833 5266 SBM View MSA
124254023 5268 Malvidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain