Gene : AL1G46000 A. lyrata v2.1

Defline:  (1 of 1) 2.7.4.2 - Phosphomevalonate kinase Genomic Order:  3367
Name:  ? AL1G46000 Secondary Identifier:  ? PAC:35930262

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5910 Arabidopsis lyrata pathologic  
Alyrata PWY-922 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G46000 0.5kb upstream 0.5kb upstream 3485   true scaffold_1: 14492729-14496213 Arabidopsis lyrata
AL1G46000 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 14492729-14493228 Arabidopsis lyrata
AL1G46000 0.5kb downstream 0.5kb downstream 3485   true scaffold_1: 14493229-14496713 Arabidopsis lyrata
AL1G46000 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14496214-14496713 Arabidopsis lyrata
AL1G46000 1.0kb upstream 1.0kb upstream 3985   true scaffold_1: 14492229-14496213 Arabidopsis lyrata
AL1G46000 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 14492229-14493228 Arabidopsis lyrata
AL1G46000 1.0kb downstream 1.0kb downstream 3985   true scaffold_1: 14493229-14497213 Arabidopsis lyrata
AL1G46000 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14496214-14497213 Arabidopsis lyrata
AL1G46000 2.0kb upstream 2.0kb upstream 4985   true scaffold_1: 14491229-14496213 Arabidopsis lyrata
AL1G46000 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 14491229-14493228 Arabidopsis lyrata
AL1G46000 2.0kb downstream 2.0kb downstream 4985   true scaffold_1: 14493229-14498213 Arabidopsis lyrata
AL1G46000 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 14496214-14498213 Arabidopsis lyrata
AL1G46000 5.0kb upstream 5.0kb upstream 7985   true scaffold_1: 14488229-14496213 Arabidopsis lyrata
AL1G46000 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 14488229-14493228 Arabidopsis lyrata
AL1G46000 5.0kb downstream 5.0kb downstream 7985   true scaffold_1: 14493229-14501213 Arabidopsis lyrata
AL1G46000 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 14496214-14501213 Arabidopsis lyrata
AL1G46000 10.0kb upstream 10.0kb upstream 12985   true scaffold_1: 14483229-14496213 Arabidopsis lyrata
AL1G46000 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 14483229-14493228 Arabidopsis lyrata
AL1G46000 10.0kb downstream 10.0kb downstream 12985   true scaffold_1: 14493229-14506213 Arabidopsis lyrata
AL1G46000 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 14496214-14506213 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365721 5261 Brassicaceae View MSA
123834522 5264 Brassicales-Malvales View MSA
124336505 5266 SBM View MSA
124239577 5268 Malvidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain