Gene : AL1G46540 A. lyrata v2.1

Defline:  (1 of 1) PTHR31803:SF7 - UBIQUINOL OXIDASE 3, MITOCHONDRIAL Genomic Order:  3413
Name:  ? AL1G46540 Secondary Identifier:  ? PAC:35933478

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4302 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G46540 0.5kb upstream 0.5kb upstream 2037   true scaffold_1: 14797652-14799688 Arabidopsis lyrata
AL1G46540 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 14799189-14799688 Arabidopsis lyrata
AL1G46540 0.5kb downstream 0.5kb downstream 2037   true scaffold_1: 14797152-14799188 Arabidopsis lyrata
AL1G46540 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14797152-14797651 Arabidopsis lyrata
AL1G46540 1.0kb upstream 1.0kb upstream 2537   true scaffold_1: 14797652-14800188 Arabidopsis lyrata
AL1G46540 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 14799189-14800188 Arabidopsis lyrata
AL1G46540 1.0kb downstream 1.0kb downstream 2537   true scaffold_1: 14796652-14799188 Arabidopsis lyrata
AL1G46540 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14796652-14797651 Arabidopsis lyrata
AL1G46540 2.0kb upstream 2.0kb upstream 3537   true scaffold_1: 14797652-14801188 Arabidopsis lyrata
AL1G46540 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 14799189-14801188 Arabidopsis lyrata
AL1G46540 2.0kb downstream 2.0kb downstream 3537   true scaffold_1: 14795652-14799188 Arabidopsis lyrata
AL1G46540 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 14795652-14797651 Arabidopsis lyrata
AL1G46540 5.0kb upstream 5.0kb upstream 6537   true scaffold_1: 14797652-14804188 Arabidopsis lyrata
AL1G46540 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 14799189-14804188 Arabidopsis lyrata
AL1G46540 5.0kb downstream 5.0kb downstream 6537   true scaffold_1: 14792652-14799188 Arabidopsis lyrata
AL1G46540 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 14792652-14797651 Arabidopsis lyrata
AL1G46540 10.0kb upstream 10.0kb upstream 11537   true scaffold_1: 14797652-14809188 Arabidopsis lyrata
AL1G46540 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 14799189-14809188 Arabidopsis lyrata
AL1G46540 10.0kb downstream 10.0kb downstream 11537   true scaffold_1: 14787652-14799188 Arabidopsis lyrata
AL1G46540 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 14787652-14797651 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367042 5261 Brassicaceae View MSA
123799283 5264 Brassicales-Malvales View MSA
124296819 5266 SBM View MSA
124240126 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain