Gene : AL1G46330 A. lyrata v2.1

Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  3396
Name:  ? AL1G46330 Secondary Identifier:  ? PAC:35935428

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1319 Arabidopsis lyrata pathologic  
Alyrata PWY4FS-7 Arabidopsis lyrata pathologic  
Alyrata PWY-7411 Arabidopsis lyrata pathologic  
Alyrata TRIGLSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G46330 0.5kb upstream 0.5kb upstream 3770   true scaffold_1: 14670259-14674028 Arabidopsis lyrata
AL1G46330 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 14673529-14674028 Arabidopsis lyrata
AL1G46330 0.5kb downstream 0.5kb downstream 3770   true scaffold_1: 14669759-14673528 Arabidopsis lyrata
AL1G46330 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 14669759-14670258 Arabidopsis lyrata
AL1G46330 1.0kb upstream 1.0kb upstream 4270   true scaffold_1: 14670259-14674528 Arabidopsis lyrata
AL1G46330 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 14673529-14674528 Arabidopsis lyrata
AL1G46330 1.0kb downstream 1.0kb downstream 4270   true scaffold_1: 14669259-14673528 Arabidopsis lyrata
AL1G46330 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 14669259-14670258 Arabidopsis lyrata
AL1G46330 2.0kb upstream 2.0kb upstream 5270   true scaffold_1: 14670259-14675528 Arabidopsis lyrata
AL1G46330 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 14673529-14675528 Arabidopsis lyrata
AL1G46330 2.0kb downstream 2.0kb downstream 5270   true scaffold_1: 14668259-14673528 Arabidopsis lyrata
AL1G46330 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 14668259-14670258 Arabidopsis lyrata
AL1G46330 5.0kb upstream 5.0kb upstream 8270   true scaffold_1: 14670259-14678528 Arabidopsis lyrata
AL1G46330 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 14673529-14678528 Arabidopsis lyrata
AL1G46330 5.0kb downstream 5.0kb downstream 8270   true scaffold_1: 14665259-14673528 Arabidopsis lyrata
AL1G46330 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 14665259-14670258 Arabidopsis lyrata
AL1G46330 10.0kb upstream 10.0kb upstream 13270   true scaffold_1: 14670259-14683528 Arabidopsis lyrata
AL1G46330 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 14673529-14683528 Arabidopsis lyrata
AL1G46330 10.0kb downstream 10.0kb downstream 13270   true scaffold_1: 14660259-14673528 Arabidopsis lyrata
AL1G46330 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 14660259-14670258 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360786 5261 Brassicaceae View MSA
123840834 5264 Brassicales-Malvales View MSA
124339399 5266 SBM View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain