Gene : AL1G51260 A. lyrata v2.1

Defline:  (1 of 4) K05573 - NAD(P)H-quinone oxidoreductase subunit 2 (ndhB) Genomic Order:  3817
Name:  ? AL1G51260 Secondary Identifier:  ? PAC:35931823

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G51260 0.5kb upstream 0.5kb upstream 2354   true scaffold_1: 21444548-21446901 Arabidopsis lyrata
AL1G51260 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 21444548-21445047 Arabidopsis lyrata
AL1G51260 0.5kb downstream 0.5kb downstream 2354   true scaffold_1: 21445048-21447401 Arabidopsis lyrata
AL1G51260 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 21446902-21447401 Arabidopsis lyrata
AL1G51260 1.0kb upstream 1.0kb upstream 2854   true scaffold_1: 21444048-21446901 Arabidopsis lyrata
AL1G51260 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 21444048-21445047 Arabidopsis lyrata
AL1G51260 1.0kb downstream 1.0kb downstream 2854   true scaffold_1: 21445048-21447901 Arabidopsis lyrata
AL1G51260 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 21446902-21447901 Arabidopsis lyrata
AL1G51260 2.0kb upstream 2.0kb upstream 3854   true scaffold_1: 21443048-21446901 Arabidopsis lyrata
AL1G51260 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 21443048-21445047 Arabidopsis lyrata
AL1G51260 2.0kb downstream 2.0kb downstream 3854   true scaffold_1: 21445048-21448901 Arabidopsis lyrata
AL1G51260 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 21446902-21448901 Arabidopsis lyrata
AL1G51260 5.0kb upstream 5.0kb upstream 6854   true scaffold_1: 21440048-21446901 Arabidopsis lyrata
AL1G51260 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 21440048-21445047 Arabidopsis lyrata
AL1G51260 5.0kb downstream 5.0kb downstream 6854   true scaffold_1: 21445048-21451901 Arabidopsis lyrata
AL1G51260 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 21446902-21451901 Arabidopsis lyrata
AL1G51260 10.0kb upstream 10.0kb upstream 11854   true scaffold_1: 21435048-21446901 Arabidopsis lyrata
AL1G51260 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 21435048-21445047 Arabidopsis lyrata
AL1G51260 10.0kb downstream 10.0kb downstream 11854   true scaffold_1: 21445048-21456901 Arabidopsis lyrata
AL1G51260 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 21446902-21456901 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332131 5261 Brassicaceae View MSA
123773239 5264 Brassicales-Malvales View MSA
124271732 5266 SBM View MSA
124249623 5268 Malvidae View MSA
124072992 5270 Rosid View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain