Gene : AL1G50560 A. lyrata v2.1

Defline:  (1 of 3) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  3761
Name:  ? AL1G50560 Secondary Identifier:  ? PAC:35934082

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G50560 0.5kb upstream 0.5kb upstream 3413   true scaffold_1: 17515881-17519293 Arabidopsis lyrata
AL1G50560 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 17515881-17516380 Arabidopsis lyrata
AL1G50560 0.5kb downstream 0.5kb downstream 3413   true scaffold_1: 17516381-17519793 Arabidopsis lyrata
AL1G50560 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 17519294-17519793 Arabidopsis lyrata
AL1G50560 1.0kb upstream 1.0kb upstream 3913   true scaffold_1: 17515381-17519293 Arabidopsis lyrata
AL1G50560 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 17515381-17516380 Arabidopsis lyrata
AL1G50560 1.0kb downstream 1.0kb downstream 3913   true scaffold_1: 17516381-17520293 Arabidopsis lyrata
AL1G50560 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 17519294-17520293 Arabidopsis lyrata
AL1G50560 2.0kb upstream 2.0kb upstream 4913   true scaffold_1: 17514381-17519293 Arabidopsis lyrata
AL1G50560 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 17514381-17516380 Arabidopsis lyrata
AL1G50560 2.0kb downstream 2.0kb downstream 4913   true scaffold_1: 17516381-17521293 Arabidopsis lyrata
AL1G50560 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 17519294-17521293 Arabidopsis lyrata
AL1G50560 5.0kb upstream 5.0kb upstream 7913   true scaffold_1: 17511381-17519293 Arabidopsis lyrata
AL1G50560 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 17511381-17516380 Arabidopsis lyrata
AL1G50560 5.0kb downstream 5.0kb downstream 7913   true scaffold_1: 17516381-17524293 Arabidopsis lyrata
AL1G50560 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 17519294-17524293 Arabidopsis lyrata
AL1G50560 10.0kb upstream 10.0kb upstream 12913   true scaffold_1: 17506381-17519293 Arabidopsis lyrata
AL1G50560 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 17506381-17516380 Arabidopsis lyrata
AL1G50560 10.0kb downstream 10.0kb downstream 12913   true scaffold_1: 17516381-17529293 Arabidopsis lyrata
AL1G50560 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 17519294-17529293 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364100 5261 Brassicaceae View MSA
123839177 5264 Brassicales-Malvales View MSA
124341928 5266 SBM View MSA
124252958 5268 Malvidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain