Gene : AL1G49620 A. lyrata v2.1
Defline:  (1 of 39) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  3685
Name:  ? AL1G49620 Secondary Identifier:  ? PAC:35934555
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G49620 0.5kb upstream 0.5kb upstream 2485   true scaffold_1: 16703206-16705690 Arabidopsis lyrata
AL1G49620 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16703206-16703705 Arabidopsis lyrata
AL1G49620 0.5kb downstream 0.5kb downstream 2485   true scaffold_1: 16703706-16706190 Arabidopsis lyrata
AL1G49620 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16705691-16706190 Arabidopsis lyrata
AL1G49620 1.0kb upstream 1.0kb upstream 2985   true scaffold_1: 16702706-16705690 Arabidopsis lyrata
AL1G49620 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16702706-16703705 Arabidopsis lyrata
AL1G49620 1.0kb downstream 1.0kb downstream 2985   true scaffold_1: 16703706-16706690 Arabidopsis lyrata
AL1G49620 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16705691-16706690 Arabidopsis lyrata
AL1G49620 2.0kb upstream 2.0kb upstream 3985   true scaffold_1: 16701706-16705690 Arabidopsis lyrata
AL1G49620 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16701706-16703705 Arabidopsis lyrata
AL1G49620 2.0kb downstream 2.0kb downstream 3985   true scaffold_1: 16703706-16707690 Arabidopsis lyrata
AL1G49620 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16705691-16707690 Arabidopsis lyrata
AL1G49620 5.0kb upstream 5.0kb upstream 6985   true scaffold_1: 16698706-16705690 Arabidopsis lyrata
AL1G49620 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16698706-16703705 Arabidopsis lyrata
AL1G49620 5.0kb downstream 5.0kb downstream 6985   true scaffold_1: 16703706-16710690 Arabidopsis lyrata
AL1G49620 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16705691-16710690 Arabidopsis lyrata
AL1G49620 10.0kb upstream 10.0kb upstream 11985   true scaffold_1: 16693706-16705690 Arabidopsis lyrata
AL1G49620 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16693706-16703705 Arabidopsis lyrata
AL1G49620 10.0kb downstream 10.0kb downstream 11985   true scaffold_1: 16703706-16715690 Arabidopsis lyrata
AL1G49620 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16705691-16715690 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361084 5261 Brassicaceae View MSA
123832959 5264 Brassicales-Malvales View MSA
124336880 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain