Gene : AL1G48840 A. lyrata v2.1

Defline:  (1 of 1) PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Genomic Order:  3612
Name:  ? AL1G48840 Secondary Identifier:  ? PAC:35934041

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G48840 0.5kb upstream 0.5kb upstream 6636   true scaffold_1: 16116807-16123442 Arabidopsis lyrata
AL1G48840 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16116807-16117306 Arabidopsis lyrata
AL1G48840 0.5kb downstream 0.5kb downstream 6636   true scaffold_1: 16117307-16123942 Arabidopsis lyrata
AL1G48840 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16123443-16123942 Arabidopsis lyrata
AL1G48840 1.0kb upstream 1.0kb upstream 7136   true scaffold_1: 16116307-16123442 Arabidopsis lyrata
AL1G48840 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16116307-16117306 Arabidopsis lyrata
AL1G48840 1.0kb downstream 1.0kb downstream 7136   true scaffold_1: 16117307-16124442 Arabidopsis lyrata
AL1G48840 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16123443-16124442 Arabidopsis lyrata
AL1G48840 2.0kb upstream 2.0kb upstream 8136   true scaffold_1: 16115307-16123442 Arabidopsis lyrata
AL1G48840 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16115307-16117306 Arabidopsis lyrata
AL1G48840 2.0kb downstream 2.0kb downstream 8136   true scaffold_1: 16117307-16125442 Arabidopsis lyrata
AL1G48840 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16123443-16125442 Arabidopsis lyrata
AL1G48840 5.0kb upstream 5.0kb upstream 11136   true scaffold_1: 16112307-16123442 Arabidopsis lyrata
AL1G48840 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16112307-16117306 Arabidopsis lyrata
AL1G48840 5.0kb downstream 5.0kb downstream 11136   true scaffold_1: 16117307-16128442 Arabidopsis lyrata
AL1G48840 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16123443-16128442 Arabidopsis lyrata
AL1G48840 10.0kb upstream 10.0kb upstream 16136   true scaffold_1: 16107307-16123442 Arabidopsis lyrata
AL1G48840 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16107307-16117306 Arabidopsis lyrata
AL1G48840 10.0kb downstream 10.0kb downstream 16136   true scaffold_1: 16117307-16133442 Arabidopsis lyrata
AL1G48840 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16123443-16133442 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364432 5261 Brassicaceae View MSA
123830954 5264 Brassicales-Malvales View MSA
124339290 5266 SBM View MSA
124242021 5268 Malvidae View MSA
124065286 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain