Gene : AL1G49260 A. lyrata v2.1

Defline:  (1 of 2) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  3652
Name:  ? AL1G49260 Secondary Identifier:  ? PAC:35932423

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6121 Arabidopsis lyrata pathologic  
Alyrata PWY-6613 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G49260 0.5kb upstream 0.5kb upstream 2145   true scaffold_1: 16553435-16555579 Arabidopsis lyrata
AL1G49260 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16555080-16555579 Arabidopsis lyrata
AL1G49260 0.5kb downstream 0.5kb downstream 2145   true scaffold_1: 16552935-16555079 Arabidopsis lyrata
AL1G49260 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16552935-16553434 Arabidopsis lyrata
AL1G49260 1.0kb upstream 1.0kb upstream 2645   true scaffold_1: 16553435-16556079 Arabidopsis lyrata
AL1G49260 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16555080-16556079 Arabidopsis lyrata
AL1G49260 1.0kb downstream 1.0kb downstream 2645   true scaffold_1: 16552435-16555079 Arabidopsis lyrata
AL1G49260 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16552435-16553434 Arabidopsis lyrata
AL1G49260 2.0kb upstream 2.0kb upstream 3645   true scaffold_1: 16553435-16557079 Arabidopsis lyrata
AL1G49260 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16555080-16557079 Arabidopsis lyrata
AL1G49260 2.0kb downstream 2.0kb downstream 3645   true scaffold_1: 16551435-16555079 Arabidopsis lyrata
AL1G49260 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16551435-16553434 Arabidopsis lyrata
AL1G49260 5.0kb upstream 5.0kb upstream 6645   true scaffold_1: 16553435-16560079 Arabidopsis lyrata
AL1G49260 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16555080-16560079 Arabidopsis lyrata
AL1G49260 5.0kb downstream 5.0kb downstream 6645   true scaffold_1: 16548435-16555079 Arabidopsis lyrata
AL1G49260 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16548435-16553434 Arabidopsis lyrata
AL1G49260 10.0kb upstream 10.0kb upstream 11645   true scaffold_1: 16553435-16565079 Arabidopsis lyrata
AL1G49260 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16555080-16565079 Arabidopsis lyrata
AL1G49260 10.0kb downstream 10.0kb downstream 11645   true scaffold_1: 16543435-16555079 Arabidopsis lyrata
AL1G49260 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16543435-16553434 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370229 5261 Brassicaceae View MSA
123835311 5264 Brassicales-Malvales View MSA
124339680 5266 SBM View MSA
124244767 5268 Malvidae View MSA
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain