Gene : AL1G53470 A. lyrata v2.1

Defline:  (1 of 3) K07748 - sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (E1.1.1.170, NSDHL, ERG26) Genomic Order:  4006
Name:  ? AL1G53470 Secondary Identifier:  ? PAC:35933599

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0 Pathways

Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G53470 0.5kb upstream 0.5kb upstream 3938   true scaffold_1: 23568173-23572110 Arabidopsis lyrata
AL1G53470 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 23568173-23568672 Arabidopsis lyrata
AL1G53470 0.5kb downstream 0.5kb downstream 3938   true scaffold_1: 23568673-23572610 Arabidopsis lyrata
AL1G53470 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 23572111-23572610 Arabidopsis lyrata
AL1G53470 1.0kb upstream 1.0kb upstream 4438   true scaffold_1: 23567673-23572110 Arabidopsis lyrata
AL1G53470 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 23567673-23568672 Arabidopsis lyrata
AL1G53470 1.0kb downstream 1.0kb downstream 4438   true scaffold_1: 23568673-23573110 Arabidopsis lyrata
AL1G53470 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 23572111-23573110 Arabidopsis lyrata
AL1G53470 2.0kb upstream 2.0kb upstream 5438   true scaffold_1: 23566673-23572110 Arabidopsis lyrata
AL1G53470 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 23566673-23568672 Arabidopsis lyrata
AL1G53470 2.0kb downstream 2.0kb downstream 5438   true scaffold_1: 23568673-23574110 Arabidopsis lyrata
AL1G53470 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 23572111-23574110 Arabidopsis lyrata
AL1G53470 5.0kb upstream 5.0kb upstream 8438   true scaffold_1: 23563673-23572110 Arabidopsis lyrata
AL1G53470 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 23563673-23568672 Arabidopsis lyrata
AL1G53470 5.0kb downstream 5.0kb downstream 8438   true scaffold_1: 23568673-23577110 Arabidopsis lyrata
AL1G53470 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 23572111-23577110 Arabidopsis lyrata
AL1G53470 10.0kb upstream 10.0kb upstream 13438   true scaffold_1: 23558673-23572110 Arabidopsis lyrata
AL1G53470 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 23558673-23568672 Arabidopsis lyrata
AL1G53470 10.0kb downstream 10.0kb downstream 13438   true scaffold_1: 23568673-23582110 Arabidopsis lyrata
AL1G53470 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 23572111-23582110 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365122 5261 Brassicaceae View MSA
123798895 5264 Brassicales-Malvales View MSA
124296471 5266 SBM View MSA
124148612 5268 Malvidae View MSA
123874575 5270 Rosid View MSA
123743534 5271 Pentapetalae View MSA
122791319 5272 Eudicot View MSA
122044485 5273 Angiosperm View MSA
121347416 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain