Gene : AL1G53380 A. lyrata v2.1

Defline:  (1 of 4) K12347 - natural resistance-associated macrophage protein (SLC11A, NRAMP) Genomic Order:  3998
Name:  ? AL1G53380 Secondary Identifier:  ? PAC:35933257

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G53380 0.5kb upstream 0.5kb upstream 3134   true scaffold_1: 23503323-23506456 Arabidopsis lyrata
AL1G53380 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 23505957-23506456 Arabidopsis lyrata
AL1G53380 0.5kb downstream 0.5kb downstream 3134   true scaffold_1: 23502823-23505956 Arabidopsis lyrata
AL1G53380 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 23502823-23503322 Arabidopsis lyrata
AL1G53380 1.0kb upstream 1.0kb upstream 3634   true scaffold_1: 23503323-23506956 Arabidopsis lyrata
AL1G53380 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 23505957-23506956 Arabidopsis lyrata
AL1G53380 1.0kb downstream 1.0kb downstream 3634   true scaffold_1: 23502323-23505956 Arabidopsis lyrata
AL1G53380 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 23502323-23503322 Arabidopsis lyrata
AL1G53380 2.0kb upstream 2.0kb upstream 4634   true scaffold_1: 23503323-23507956 Arabidopsis lyrata
AL1G53380 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 23505957-23507956 Arabidopsis lyrata
AL1G53380 2.0kb downstream 2.0kb downstream 4634   true scaffold_1: 23501323-23505956 Arabidopsis lyrata
AL1G53380 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 23501323-23503322 Arabidopsis lyrata
AL1G53380 5.0kb upstream 5.0kb upstream 7634   true scaffold_1: 23503323-23510956 Arabidopsis lyrata
AL1G53380 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 23505957-23510956 Arabidopsis lyrata
AL1G53380 5.0kb downstream 5.0kb downstream 7634   true scaffold_1: 23498323-23505956 Arabidopsis lyrata
AL1G53380 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 23498323-23503322 Arabidopsis lyrata
AL1G53380 10.0kb upstream 10.0kb upstream 12634   true scaffold_1: 23503323-23515956 Arabidopsis lyrata
AL1G53380 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 23505957-23515956 Arabidopsis lyrata
AL1G53380 10.0kb downstream 10.0kb downstream 12634   true scaffold_1: 23493323-23505956 Arabidopsis lyrata
AL1G53380 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 23493323-23503322 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368663 5261 Brassicaceae View MSA
123832200 5264 Brassicales-Malvales View MSA
124343623 5266 SBM View MSA
124240405 5268 Malvidae View MSA
124067526 5270 Rosid View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain