Gene : AL1G52160 A. lyrata v2.1

Defline:  (1 of 4) PTHR10177:SF212 - CYCLIN-A2-1-RELATED Genomic Order:  3894
Name:  ? AL1G52160 Secondary Identifier:  ? PAC:35932815

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G52160 0.5kb upstream 0.5kb upstream 2995   true scaffold_1: 22522218-22525212 Arabidopsis lyrata
AL1G52160 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 22524713-22525212 Arabidopsis lyrata
AL1G52160 0.5kb downstream 0.5kb downstream 2995   true scaffold_1: 22521718-22524712 Arabidopsis lyrata
AL1G52160 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 22521718-22522217 Arabidopsis lyrata
AL1G52160 1.0kb upstream 1.0kb upstream 3495   true scaffold_1: 22522218-22525712 Arabidopsis lyrata
AL1G52160 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 22524713-22525712 Arabidopsis lyrata
AL1G52160 1.0kb downstream 1.0kb downstream 3495   true scaffold_1: 22521218-22524712 Arabidopsis lyrata
AL1G52160 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 22521218-22522217 Arabidopsis lyrata
AL1G52160 2.0kb upstream 2.0kb upstream 4495   true scaffold_1: 22522218-22526712 Arabidopsis lyrata
AL1G52160 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 22524713-22526712 Arabidopsis lyrata
AL1G52160 2.0kb downstream 2.0kb downstream 4495   true scaffold_1: 22520218-22524712 Arabidopsis lyrata
AL1G52160 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 22520218-22522217 Arabidopsis lyrata
AL1G52160 5.0kb upstream 5.0kb upstream 7495   true scaffold_1: 22522218-22529712 Arabidopsis lyrata
AL1G52160 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 22524713-22529712 Arabidopsis lyrata
AL1G52160 5.0kb downstream 5.0kb downstream 7495   true scaffold_1: 22517218-22524712 Arabidopsis lyrata
AL1G52160 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 22517218-22522217 Arabidopsis lyrata
AL1G52160 10.0kb upstream 10.0kb upstream 12495   true scaffold_1: 22522218-22534712 Arabidopsis lyrata
AL1G52160 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 22524713-22534712 Arabidopsis lyrata
AL1G52160 10.0kb downstream 10.0kb downstream 12495   true scaffold_1: 22512218-22524712 Arabidopsis lyrata
AL1G52160 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 22512218-22522217 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366037 5261 Brassicaceae View MSA
123830219 5264 Brassicales-Malvales View MSA
124339632 5266 SBM View MSA
124253552 5268 Malvidae View MSA
124060545 5270 Rosid View MSA
123738691 5271 Pentapetalae View MSA
122789917 5272 Eudicot View MSA
122045619 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349586 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain