Gene : AL1G54950 A. lyrata v2.1

Defline:  (1 of 3) K02881 - large subunit ribosomal protein L18 (RP-L18, MRPL18, rplR) Genomic Order:  4135
Name:  ? AL1G54950 Secondary Identifier:  ? PAC:35932599

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G54950 0.5kb upstream 0.5kb upstream 1761   true scaffold_1: 24536936-24538696 Arabidopsis lyrata
AL1G54950 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 24536936-24537435 Arabidopsis lyrata
AL1G54950 0.5kb downstream 0.5kb downstream 1761   true scaffold_1: 24537436-24539196 Arabidopsis lyrata
AL1G54950 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 24538697-24539196 Arabidopsis lyrata
AL1G54950 1.0kb upstream 1.0kb upstream 2261   true scaffold_1: 24536436-24538696 Arabidopsis lyrata
AL1G54950 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 24536436-24537435 Arabidopsis lyrata
AL1G54950 1.0kb downstream 1.0kb downstream 2261   true scaffold_1: 24537436-24539696 Arabidopsis lyrata
AL1G54950 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 24538697-24539696 Arabidopsis lyrata
AL1G54950 2.0kb upstream 2.0kb upstream 3261   true scaffold_1: 24535436-24538696 Arabidopsis lyrata
AL1G54950 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 24535436-24537435 Arabidopsis lyrata
AL1G54950 2.0kb downstream 2.0kb downstream 3261   true scaffold_1: 24537436-24540696 Arabidopsis lyrata
AL1G54950 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 24538697-24540696 Arabidopsis lyrata
AL1G54950 5.0kb upstream 5.0kb upstream 6261   true scaffold_1: 24532436-24538696 Arabidopsis lyrata
AL1G54950 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 24532436-24537435 Arabidopsis lyrata
AL1G54950 5.0kb downstream 5.0kb downstream 6261   true scaffold_1: 24537436-24543696 Arabidopsis lyrata
AL1G54950 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 24538697-24543696 Arabidopsis lyrata
AL1G54950 10.0kb upstream 10.0kb upstream 11261   true scaffold_1: 24527436-24538696 Arabidopsis lyrata
AL1G54950 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 24527436-24537435 Arabidopsis lyrata
AL1G54950 10.0kb downstream 10.0kb downstream 11261   true scaffold_1: 24537436-24548696 Arabidopsis lyrata
AL1G54950 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 24538697-24548696 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362132 5261 Brassicaceae View MSA
123830079 5264 Brassicales-Malvales View MSA
124344652 5266 SBM View MSA
124239065 5268 Malvidae View MSA
124064219 5270 Rosid View MSA
123746158 5271 Pentapetalae View MSA
122789168 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain