Gene : AL1G54920 A. lyrata v2.1

Defline:  (1 of 3) 3.1.2.28 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase Genomic Order:  4132
Name:  ? AL1G54920 Secondary Identifier:  ? PAC:35930903

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5837 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G54920 0.5kb upstream 0.5kb upstream 1615   true scaffold_1: 24516577-24518191 Arabidopsis lyrata
AL1G54920 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 24517692-24518191 Arabidopsis lyrata
AL1G54920 0.5kb downstream 0.5kb downstream 1615   true scaffold_1: 24516077-24517691 Arabidopsis lyrata
AL1G54920 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 24516077-24516576 Arabidopsis lyrata
AL1G54920 1.0kb upstream 1.0kb upstream 2115   true scaffold_1: 24516577-24518691 Arabidopsis lyrata
AL1G54920 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 24517692-24518691 Arabidopsis lyrata
AL1G54920 1.0kb downstream 1.0kb downstream 2115   true scaffold_1: 24515577-24517691 Arabidopsis lyrata
AL1G54920 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 24515577-24516576 Arabidopsis lyrata
AL1G54920 2.0kb upstream 2.0kb upstream 3115   true scaffold_1: 24516577-24519691 Arabidopsis lyrata
AL1G54920 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 24517692-24519691 Arabidopsis lyrata
AL1G54920 2.0kb downstream 2.0kb downstream 3115   true scaffold_1: 24514577-24517691 Arabidopsis lyrata
AL1G54920 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 24514577-24516576 Arabidopsis lyrata
AL1G54920 5.0kb upstream 5.0kb upstream 6115   true scaffold_1: 24516577-24522691 Arabidopsis lyrata
AL1G54920 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 24517692-24522691 Arabidopsis lyrata
AL1G54920 5.0kb downstream 5.0kb downstream 6115   true scaffold_1: 24511577-24517691 Arabidopsis lyrata
AL1G54920 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 24511577-24516576 Arabidopsis lyrata
AL1G54920 10.0kb upstream 10.0kb upstream 11115   true scaffold_1: 24516577-24527691 Arabidopsis lyrata
AL1G54920 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 24517692-24527691 Arabidopsis lyrata
AL1G54920 10.0kb downstream 10.0kb downstream 11115   true scaffold_1: 24506577-24517691 Arabidopsis lyrata
AL1G54920 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 24506577-24516576 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361560 5261 Brassicaceae View MSA
123835813 5264 Brassicales-Malvales View MSA
124338385 5266 SBM View MSA
124248114 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain