Gene : AL1G55280 A. lyrata v2.1

Defline:  (1 of 2) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Genomic Order:  4171
Name:  ? AL1G55280 Secondary Identifier:  ? PAC:35930580

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G55280 0.5kb upstream 0.5kb upstream 3258   true scaffold_1: 24710163-24713420 Arabidopsis lyrata
AL1G55280 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 24712921-24713420 Arabidopsis lyrata
AL1G55280 0.5kb downstream 0.5kb downstream 3258   true scaffold_1: 24709663-24712920 Arabidopsis lyrata
AL1G55280 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 24709663-24710162 Arabidopsis lyrata
AL1G55280 1.0kb upstream 1.0kb upstream 3758   true scaffold_1: 24710163-24713920 Arabidopsis lyrata
AL1G55280 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 24712921-24713920 Arabidopsis lyrata
AL1G55280 1.0kb downstream 1.0kb downstream 3758   true scaffold_1: 24709163-24712920 Arabidopsis lyrata
AL1G55280 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 24709163-24710162 Arabidopsis lyrata
AL1G55280 2.0kb upstream 2.0kb upstream 4758   true scaffold_1: 24710163-24714920 Arabidopsis lyrata
AL1G55280 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 24712921-24714920 Arabidopsis lyrata
AL1G55280 2.0kb downstream 2.0kb downstream 4758   true scaffold_1: 24708163-24712920 Arabidopsis lyrata
AL1G55280 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 24708163-24710162 Arabidopsis lyrata
AL1G55280 5.0kb upstream 5.0kb upstream 7758   true scaffold_1: 24710163-24717920 Arabidopsis lyrata
AL1G55280 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 24712921-24717920 Arabidopsis lyrata
AL1G55280 5.0kb downstream 5.0kb downstream 7758   true scaffold_1: 24705163-24712920 Arabidopsis lyrata
AL1G55280 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 24705163-24710162 Arabidopsis lyrata
AL1G55280 10.0kb upstream 10.0kb upstream 12758   true scaffold_1: 24710163-24722920 Arabidopsis lyrata
AL1G55280 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 24712921-24722920 Arabidopsis lyrata
AL1G55280 10.0kb downstream 10.0kb downstream 12758   true scaffold_1: 24700163-24712920 Arabidopsis lyrata
AL1G55280 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 24700163-24710162 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122374716 5261 Brassicaceae View MSA
123839961 5264 Brassicales-Malvales View MSA
124349983 5266 SBM View MSA
124239615 5268 Malvidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain