Gene : AL1G59110 A. lyrata v2.1

Defline:  (1 of 1) 2.8.1.4//2.8.1.7 - tRNA sulfurtransferase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  4505
Name:  ? AL1G59110 Secondary Identifier:  ? PAC:35934407

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1021 Arabidopsis lyrata pathologic  
Alyrata PWY-6823 Arabidopsis lyrata pathologic  
Alyrata PWY-7250 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G59110 0.5kb upstream 0.5kb upstream 3342   true scaffold_1: 27039697-27043038 Arabidopsis lyrata
AL1G59110 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 27042539-27043038 Arabidopsis lyrata
AL1G59110 0.5kb downstream 0.5kb downstream 3342   true scaffold_1: 27039197-27042538 Arabidopsis lyrata
AL1G59110 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 27039197-27039696 Arabidopsis lyrata
AL1G59110 1.0kb upstream 1.0kb upstream 3842   true scaffold_1: 27039697-27043538 Arabidopsis lyrata
AL1G59110 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 27042539-27043538 Arabidopsis lyrata
AL1G59110 1.0kb downstream 1.0kb downstream 3842   true scaffold_1: 27038697-27042538 Arabidopsis lyrata
AL1G59110 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 27038697-27039696 Arabidopsis lyrata
AL1G59110 2.0kb upstream 2.0kb upstream 4842   true scaffold_1: 27039697-27044538 Arabidopsis lyrata
AL1G59110 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 27042539-27044538 Arabidopsis lyrata
AL1G59110 2.0kb downstream 2.0kb downstream 4842   true scaffold_1: 27037697-27042538 Arabidopsis lyrata
AL1G59110 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 27037697-27039696 Arabidopsis lyrata
AL1G59110 5.0kb upstream 5.0kb upstream 7842   true scaffold_1: 27039697-27047538 Arabidopsis lyrata
AL1G59110 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 27042539-27047538 Arabidopsis lyrata
AL1G59110 5.0kb downstream 5.0kb downstream 7842   true scaffold_1: 27034697-27042538 Arabidopsis lyrata
AL1G59110 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 27034697-27039696 Arabidopsis lyrata
AL1G59110 10.0kb upstream 10.0kb upstream 12842   true scaffold_1: 27039697-27052538 Arabidopsis lyrata
AL1G59110 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 27042539-27052538 Arabidopsis lyrata
AL1G59110 10.0kb downstream 10.0kb downstream 12842   true scaffold_1: 27029697-27042538 Arabidopsis lyrata
AL1G59110 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 27029697-27039696 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381679 5261 Brassicaceae View MSA
123841025 5264 Brassicales-Malvales View MSA
124345710 5266 SBM View MSA
124242498 5268 Malvidae View MSA
124061540 5270 Rosid View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain