Gene : AL1G58480 A. lyrata v2.1

Defline:  (1 of 3) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  4451
Name:  ? AL1G58480 Secondary Identifier:  ? PAC:35930436

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G58480 0.5kb upstream 0.5kb upstream 1659   true scaffold_1: 26538550-26540208 Arabidopsis lyrata
AL1G58480 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 26538550-26539049 Arabidopsis lyrata
AL1G58480 0.5kb downstream 0.5kb downstream 1659   true scaffold_1: 26539050-26540708 Arabidopsis lyrata
AL1G58480 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 26540209-26540708 Arabidopsis lyrata
AL1G58480 1.0kb upstream 1.0kb upstream 2159   true scaffold_1: 26538050-26540208 Arabidopsis lyrata
AL1G58480 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 26538050-26539049 Arabidopsis lyrata
AL1G58480 1.0kb downstream 1.0kb downstream 2159   true scaffold_1: 26539050-26541208 Arabidopsis lyrata
AL1G58480 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 26540209-26541208 Arabidopsis lyrata
AL1G58480 2.0kb upstream 2.0kb upstream 3159   true scaffold_1: 26537050-26540208 Arabidopsis lyrata
AL1G58480 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 26537050-26539049 Arabidopsis lyrata
AL1G58480 2.0kb downstream 2.0kb downstream 3159   true scaffold_1: 26539050-26542208 Arabidopsis lyrata
AL1G58480 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 26540209-26542208 Arabidopsis lyrata
AL1G58480 5.0kb upstream 5.0kb upstream 6159   true scaffold_1: 26534050-26540208 Arabidopsis lyrata
AL1G58480 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 26534050-26539049 Arabidopsis lyrata
AL1G58480 5.0kb downstream 5.0kb downstream 6159   true scaffold_1: 26539050-26545208 Arabidopsis lyrata
AL1G58480 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 26540209-26545208 Arabidopsis lyrata
AL1G58480 10.0kb upstream 10.0kb upstream 11159   true scaffold_1: 26529050-26540208 Arabidopsis lyrata
AL1G58480 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 26529050-26539049 Arabidopsis lyrata
AL1G58480 10.0kb downstream 10.0kb downstream 11159   true scaffold_1: 26539050-26550208 Arabidopsis lyrata
AL1G58480 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 26540209-26550208 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375911 5261 Brassicaceae View MSA
123840061 5264 Brassicales-Malvales View MSA
124344011 5266 SBM View MSA
124242311 5268 Malvidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain