Gene : AL1G57780 A. lyrata v2.1

Defline:  (1 of 2) PTHR23074:SF95 - AAA-TYPE ATPASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4386
Name:  ? AL1G57780 Secondary Identifier:  ? PAC:35934492

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G57780 0.5kb upstream 0.5kb upstream 10116   true scaffold_1: 26137843-26147958 Arabidopsis lyrata
AL1G57780 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 26147459-26147958 Arabidopsis lyrata
AL1G57780 0.5kb downstream 0.5kb downstream 10116   true scaffold_1: 26137343-26147458 Arabidopsis lyrata
AL1G57780 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 26137343-26137842 Arabidopsis lyrata
AL1G57780 1.0kb upstream 1.0kb upstream 10616   true scaffold_1: 26137843-26148458 Arabidopsis lyrata
AL1G57780 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 26147459-26148458 Arabidopsis lyrata
AL1G57780 1.0kb downstream 1.0kb downstream 10616   true scaffold_1: 26136843-26147458 Arabidopsis lyrata
AL1G57780 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 26136843-26137842 Arabidopsis lyrata
AL1G57780 2.0kb upstream 2.0kb upstream 11616   true scaffold_1: 26137843-26149458 Arabidopsis lyrata
AL1G57780 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 26147459-26149458 Arabidopsis lyrata
AL1G57780 2.0kb downstream 2.0kb downstream 11616   true scaffold_1: 26135843-26147458 Arabidopsis lyrata
AL1G57780 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 26135843-26137842 Arabidopsis lyrata
AL1G57780 5.0kb upstream 5.0kb upstream 14616   true scaffold_1: 26137843-26152458 Arabidopsis lyrata
AL1G57780 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 26147459-26152458 Arabidopsis lyrata
AL1G57780 5.0kb downstream 5.0kb downstream 14616   true scaffold_1: 26132843-26147458 Arabidopsis lyrata
AL1G57780 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 26132843-26137842 Arabidopsis lyrata
AL1G57780 10.0kb upstream 10.0kb upstream 19616   true scaffold_1: 26137843-26157458 Arabidopsis lyrata
AL1G57780 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 26147459-26157458 Arabidopsis lyrata
AL1G57780 10.0kb downstream 10.0kb downstream 19616   true scaffold_1: 26127843-26147458 Arabidopsis lyrata
AL1G57780 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 26127843-26137842 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368511 5261 Brassicaceae View MSA
123836103 5264 Brassicales-Malvales View MSA
124322132 5266 SBM View MSA
124249795 5268 Malvidae View MSA
124068786 5270 Rosid View MSA
123736578 5271 Pentapetalae View MSA
122786690 5272 Eudicot View MSA
122044741 5273 Angiosperm View MSA
121348057 5274 Embryophyte View MSA
123380716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain