Gene : AL1G57530 A. lyrata v2.1

Defline:  (1 of 2) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  4366
Name:  ? AL1G57530 Secondary Identifier:  ? PAC:35933538

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G57530 0.5kb upstream 0.5kb upstream 1373   true scaffold_1: 25992838-25994210 Arabidopsis lyrata
AL1G57530 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 25992838-25993337 Arabidopsis lyrata
AL1G57530 0.5kb downstream 0.5kb downstream 1373   true scaffold_1: 25993338-25994710 Arabidopsis lyrata
AL1G57530 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 25994211-25994710 Arabidopsis lyrata
AL1G57530 1.0kb upstream 1.0kb upstream 1873   true scaffold_1: 25992338-25994210 Arabidopsis lyrata
AL1G57530 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 25992338-25993337 Arabidopsis lyrata
AL1G57530 1.0kb downstream 1.0kb downstream 1873   true scaffold_1: 25993338-25995210 Arabidopsis lyrata
AL1G57530 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 25994211-25995210 Arabidopsis lyrata
AL1G57530 2.0kb upstream 2.0kb upstream 2873   true scaffold_1: 25991338-25994210 Arabidopsis lyrata
AL1G57530 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 25991338-25993337 Arabidopsis lyrata
AL1G57530 2.0kb downstream 2.0kb downstream 2873   true scaffold_1: 25993338-25996210 Arabidopsis lyrata
AL1G57530 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 25994211-25996210 Arabidopsis lyrata
AL1G57530 5.0kb upstream 5.0kb upstream 5873   true scaffold_1: 25988338-25994210 Arabidopsis lyrata
AL1G57530 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 25988338-25993337 Arabidopsis lyrata
AL1G57530 5.0kb downstream 5.0kb downstream 5873   true scaffold_1: 25993338-25999210 Arabidopsis lyrata
AL1G57530 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 25994211-25999210 Arabidopsis lyrata
AL1G57530 10.0kb upstream 10.0kb upstream 10873   true scaffold_1: 25983338-25994210 Arabidopsis lyrata
AL1G57530 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 25983338-25993337 Arabidopsis lyrata
AL1G57530 10.0kb downstream 10.0kb downstream 10873   true scaffold_1: 25993338-26004210 Arabidopsis lyrata
AL1G57530 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 25994211-26004210 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365956 5261 Brassicaceae View MSA
123828421 5264 Brassicales-Malvales View MSA
124345551 5266 SBM View MSA
124239593 5268 Malvidae View MSA
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain