Gene : AL1G63550 A. lyrata v2.1

Defline:  (1 of 5) PTHR22763:SF59 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  4908
Name:  ? AL1G63550 Secondary Identifier:  ? PAC:35930687

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63550 0.5kb upstream 0.5kb upstream 2344   true scaffold_1: 29336891-29339234 Arabidopsis lyrata
AL1G63550 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29338735-29339234 Arabidopsis lyrata
AL1G63550 0.5kb downstream 0.5kb downstream 2344   true scaffold_1: 29336391-29338734 Arabidopsis lyrata
AL1G63550 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29336391-29336890 Arabidopsis lyrata
AL1G63550 1.0kb upstream 1.0kb upstream 2844   true scaffold_1: 29336891-29339734 Arabidopsis lyrata
AL1G63550 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29338735-29339734 Arabidopsis lyrata
AL1G63550 1.0kb downstream 1.0kb downstream 2844   true scaffold_1: 29335891-29338734 Arabidopsis lyrata
AL1G63550 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29335891-29336890 Arabidopsis lyrata
AL1G63550 2.0kb upstream 2.0kb upstream 3844   true scaffold_1: 29336891-29340734 Arabidopsis lyrata
AL1G63550 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29338735-29340734 Arabidopsis lyrata
AL1G63550 2.0kb downstream 2.0kb downstream 3844   true scaffold_1: 29334891-29338734 Arabidopsis lyrata
AL1G63550 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29334891-29336890 Arabidopsis lyrata
AL1G63550 5.0kb upstream 5.0kb upstream 6844   true scaffold_1: 29336891-29343734 Arabidopsis lyrata
AL1G63550 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29338735-29343734 Arabidopsis lyrata
AL1G63550 5.0kb downstream 5.0kb downstream 6844   true scaffold_1: 29331891-29338734 Arabidopsis lyrata
AL1G63550 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29331891-29336890 Arabidopsis lyrata
AL1G63550 10.0kb upstream 10.0kb upstream 11844   true scaffold_1: 29336891-29348734 Arabidopsis lyrata
AL1G63550 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29338735-29348734 Arabidopsis lyrata
AL1G63550 10.0kb downstream 10.0kb downstream 11844   true scaffold_1: 29326891-29338734 Arabidopsis lyrata
AL1G63550 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29326891-29336890 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375687 5261 Brassicaceae View MSA
123801026 5264 Brassicales-Malvales View MSA
124298373 5266 SBM View MSA
124150029 5268 Malvidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain