Gene : AL1G63970 A. lyrata v2.1

Defline:  (1 of 1) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  4946
Name:  ? AL1G63970 Secondary Identifier:  ? PAC:35933786

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63970 0.5kb upstream 0.5kb upstream 3253   true scaffold_1: 29533591-29536843 Arabidopsis lyrata
AL1G63970 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29533591-29534090 Arabidopsis lyrata
AL1G63970 0.5kb downstream 0.5kb downstream 3253   true scaffold_1: 29534091-29537343 Arabidopsis lyrata
AL1G63970 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29536844-29537343 Arabidopsis lyrata
AL1G63970 1.0kb upstream 1.0kb upstream 3753   true scaffold_1: 29533091-29536843 Arabidopsis lyrata
AL1G63970 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29533091-29534090 Arabidopsis lyrata
AL1G63970 1.0kb downstream 1.0kb downstream 3753   true scaffold_1: 29534091-29537843 Arabidopsis lyrata
AL1G63970 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29536844-29537843 Arabidopsis lyrata
AL1G63970 2.0kb upstream 2.0kb upstream 4753   true scaffold_1: 29532091-29536843 Arabidopsis lyrata
AL1G63970 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29532091-29534090 Arabidopsis lyrata
AL1G63970 2.0kb downstream 2.0kb downstream 4753   true scaffold_1: 29534091-29538843 Arabidopsis lyrata
AL1G63970 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29536844-29538843 Arabidopsis lyrata
AL1G63970 5.0kb upstream 5.0kb upstream 7753   true scaffold_1: 29529091-29536843 Arabidopsis lyrata
AL1G63970 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29529091-29534090 Arabidopsis lyrata
AL1G63970 5.0kb downstream 5.0kb downstream 7753   true scaffold_1: 29534091-29541843 Arabidopsis lyrata
AL1G63970 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29536844-29541843 Arabidopsis lyrata
AL1G63970 10.0kb upstream 10.0kb upstream 12753   true scaffold_1: 29524091-29536843 Arabidopsis lyrata
AL1G63970 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29524091-29534090 Arabidopsis lyrata
AL1G63970 10.0kb downstream 10.0kb downstream 12753   true scaffold_1: 29534091-29546843 Arabidopsis lyrata
AL1G63970 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29536844-29546843 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371179 5261 Brassicaceae View MSA
123830596 5264 Brassicales-Malvales View MSA
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain