Gene : AL1G63840 A. lyrata v2.1
Defline:  (1 of 2) K03141 - transcription initiation factor TFIIH subunit 1 (TFIIH1, GTF2H1, TFB1) Genomic Order:  4934
Name:  ? AL1G63840 Secondary Identifier:  ? PAC:35933076
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63840 0.5kb upstream 0.5kb upstream 5169   true scaffold_1: 29495471-29500639 Arabidopsis lyrata
AL1G63840 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29500140-29500639 Arabidopsis lyrata
AL1G63840 0.5kb downstream 0.5kb downstream 5169   true scaffold_1: 29494971-29500139 Arabidopsis lyrata
AL1G63840 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29494971-29495470 Arabidopsis lyrata
AL1G63840 1.0kb upstream 1.0kb upstream 5669   true scaffold_1: 29495471-29501139 Arabidopsis lyrata
AL1G63840 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29500140-29501139 Arabidopsis lyrata
AL1G63840 1.0kb downstream 1.0kb downstream 5669   true scaffold_1: 29494471-29500139 Arabidopsis lyrata
AL1G63840 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29494471-29495470 Arabidopsis lyrata
AL1G63840 2.0kb upstream 2.0kb upstream 6669   true scaffold_1: 29495471-29502139 Arabidopsis lyrata
AL1G63840 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29500140-29502139 Arabidopsis lyrata
AL1G63840 2.0kb downstream 2.0kb downstream 6669   true scaffold_1: 29493471-29500139 Arabidopsis lyrata
AL1G63840 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29493471-29495470 Arabidopsis lyrata
AL1G63840 5.0kb upstream 5.0kb upstream 9669   true scaffold_1: 29495471-29505139 Arabidopsis lyrata
AL1G63840 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29500140-29505139 Arabidopsis lyrata
AL1G63840 5.0kb downstream 5.0kb downstream 9669   true scaffold_1: 29490471-29500139 Arabidopsis lyrata
AL1G63840 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29490471-29495470 Arabidopsis lyrata
AL1G63840 10.0kb upstream 10.0kb upstream 14669   true scaffold_1: 29495471-29510139 Arabidopsis lyrata
AL1G63840 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29500140-29510139 Arabidopsis lyrata
AL1G63840 10.0kb downstream 10.0kb downstream 14669   true scaffold_1: 29485471-29500139 Arabidopsis lyrata
AL1G63840 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29485471-29495470 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373978 5261 Brassicaceae View MSA
123829518 5264 Brassicales-Malvales View MSA
124341287 5266 SBM View MSA
124236895 5268 Malvidae View MSA
124068692 5270 Rosid View MSA
123738244 5271 Pentapetalae View MSA
122787782 5272 Eudicot View MSA
122047682 5273 Angiosperm View MSA
121347472 5274 Embryophyte View MSA
123425427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain