Gene : AL1G62950 A. lyrata v2.1

Defline:  (1 of 2) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4852
Name:  ? AL1G62950 Secondary Identifier:  ? PAC:35935738

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5173 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PYRUVDEHYD-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G62950 0.5kb upstream 0.5kb upstream 4802   true scaffold_1: 29032840-29037641 Arabidopsis lyrata
AL1G62950 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29037142-29037641 Arabidopsis lyrata
AL1G62950 0.5kb downstream 0.5kb downstream 4802   true scaffold_1: 29032340-29037141 Arabidopsis lyrata
AL1G62950 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29032340-29032839 Arabidopsis lyrata
AL1G62950 1.0kb upstream 1.0kb upstream 5302   true scaffold_1: 29032840-29038141 Arabidopsis lyrata
AL1G62950 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29037142-29038141 Arabidopsis lyrata
AL1G62950 1.0kb downstream 1.0kb downstream 5302   true scaffold_1: 29031840-29037141 Arabidopsis lyrata
AL1G62950 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29031840-29032839 Arabidopsis lyrata
AL1G62950 2.0kb upstream 2.0kb upstream 6302   true scaffold_1: 29032840-29039141 Arabidopsis lyrata
AL1G62950 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29037142-29039141 Arabidopsis lyrata
AL1G62950 2.0kb downstream 2.0kb downstream 6302   true scaffold_1: 29030840-29037141 Arabidopsis lyrata
AL1G62950 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29030840-29032839 Arabidopsis lyrata
AL1G62950 5.0kb upstream 5.0kb upstream 9302   true scaffold_1: 29032840-29042141 Arabidopsis lyrata
AL1G62950 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29037142-29042141 Arabidopsis lyrata
AL1G62950 5.0kb downstream 5.0kb downstream 9302   true scaffold_1: 29027840-29037141 Arabidopsis lyrata
AL1G62950 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29027840-29032839 Arabidopsis lyrata
AL1G62950 10.0kb upstream 10.0kb upstream 14302   true scaffold_1: 29032840-29047141 Arabidopsis lyrata
AL1G62950 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29037142-29047141 Arabidopsis lyrata
AL1G62950 10.0kb downstream 10.0kb downstream 14302   true scaffold_1: 29022840-29037141 Arabidopsis lyrata
AL1G62950 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29022840-29032839 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372168 5261 Brassicaceae View MSA
123835606 5264 Brassicales-Malvales View MSA
124344538 5266 SBM View MSA
124243608 5268 Malvidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain