Gene : AL1G63400 A. lyrata v2.1

Defline:  (1 of 1) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  4895
Name:  ? AL1G63400 Secondary Identifier:  ? PAC:35932568

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63400 0.5kb upstream 0.5kb upstream 11674   true scaffold_1: 29243851-29255524 Arabidopsis lyrata
AL1G63400 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29255025-29255524 Arabidopsis lyrata
AL1G63400 0.5kb downstream 0.5kb downstream 11674   true scaffold_1: 29243351-29255024 Arabidopsis lyrata
AL1G63400 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29243351-29243850 Arabidopsis lyrata
AL1G63400 1.0kb upstream 1.0kb upstream 12174   true scaffold_1: 29243851-29256024 Arabidopsis lyrata
AL1G63400 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29255025-29256024 Arabidopsis lyrata
AL1G63400 1.0kb downstream 1.0kb downstream 12174   true scaffold_1: 29242851-29255024 Arabidopsis lyrata
AL1G63400 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29242851-29243850 Arabidopsis lyrata
AL1G63400 2.0kb upstream 2.0kb upstream 13174   true scaffold_1: 29243851-29257024 Arabidopsis lyrata
AL1G63400 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29255025-29257024 Arabidopsis lyrata
AL1G63400 2.0kb downstream 2.0kb downstream 13174   true scaffold_1: 29241851-29255024 Arabidopsis lyrata
AL1G63400 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29241851-29243850 Arabidopsis lyrata
AL1G63400 5.0kb upstream 5.0kb upstream 16174   true scaffold_1: 29243851-29260024 Arabidopsis lyrata
AL1G63400 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29255025-29260024 Arabidopsis lyrata
AL1G63400 5.0kb downstream 5.0kb downstream 16174   true scaffold_1: 29238851-29255024 Arabidopsis lyrata
AL1G63400 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29238851-29243850 Arabidopsis lyrata
AL1G63400 10.0kb upstream 10.0kb upstream 21174   true scaffold_1: 29243851-29265024 Arabidopsis lyrata
AL1G63400 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29255025-29265024 Arabidopsis lyrata
AL1G63400 10.0kb downstream 10.0kb downstream 21174   true scaffold_1: 29233851-29255024 Arabidopsis lyrata
AL1G63400 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29233851-29243850 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372881 5261 Brassicaceae View MSA
123834499 5264 Brassicales-Malvales View MSA
124339874 5266 SBM View MSA
124238685 5268 Malvidae View MSA
124067858 5270 Rosid View MSA
123739465 5271 Pentapetalae View MSA
122788693 5272 Eudicot View MSA
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain