Gene : AL1G63220 A. lyrata v2.1

Defline:  (1 of 1) PTHR18896:SF79 - PHOSPHOLIPASE D EPSILON Genomic Order:  4877
Name:  ? AL1G63220 Secondary Identifier:  ? PAC:35932035

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPASYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3561 Arabidopsis lyrata pathologic  
Alyrata PWY-7039 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G63220 0.5kb upstream 0.5kb upstream 3422   true scaffold_1: 29169560-29172981 Arabidopsis lyrata
AL1G63220 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29172482-29172981 Arabidopsis lyrata
AL1G63220 0.5kb downstream 0.5kb downstream 3422   true scaffold_1: 29169060-29172481 Arabidopsis lyrata
AL1G63220 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29169060-29169559 Arabidopsis lyrata
AL1G63220 1.0kb upstream 1.0kb upstream 3922   true scaffold_1: 29169560-29173481 Arabidopsis lyrata
AL1G63220 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29172482-29173481 Arabidopsis lyrata
AL1G63220 1.0kb downstream 1.0kb downstream 3922   true scaffold_1: 29168560-29172481 Arabidopsis lyrata
AL1G63220 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29168560-29169559 Arabidopsis lyrata
AL1G63220 2.0kb upstream 2.0kb upstream 4922   true scaffold_1: 29169560-29174481 Arabidopsis lyrata
AL1G63220 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29172482-29174481 Arabidopsis lyrata
AL1G63220 2.0kb downstream 2.0kb downstream 4922   true scaffold_1: 29167560-29172481 Arabidopsis lyrata
AL1G63220 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29167560-29169559 Arabidopsis lyrata
AL1G63220 5.0kb upstream 5.0kb upstream 7922   true scaffold_1: 29169560-29177481 Arabidopsis lyrata
AL1G63220 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29172482-29177481 Arabidopsis lyrata
AL1G63220 5.0kb downstream 5.0kb downstream 7922   true scaffold_1: 29164560-29172481 Arabidopsis lyrata
AL1G63220 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29164560-29169559 Arabidopsis lyrata
AL1G63220 10.0kb upstream 10.0kb upstream 12922   true scaffold_1: 29169560-29182481 Arabidopsis lyrata
AL1G63220 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29172482-29182481 Arabidopsis lyrata
AL1G63220 10.0kb downstream 10.0kb downstream 12922   true scaffold_1: 29159560-29172481 Arabidopsis lyrata
AL1G63220 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29159560-29169559 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361991 5261 Brassicaceae View MSA
123828918 5264 Brassicales-Malvales View MSA
124342668 5266 SBM View MSA
124242192 5268 Malvidae View MSA
124061086 5270 Rosid View MSA
123739430 5271 Pentapetalae View MSA
122786785 5272 Eudicot View MSA
122045742 5273 Angiosperm View MSA
121310493 5274 Embryophyte View MSA
123347963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain