Gene : AL172U10020 A. lyrata v2.1
Defline:  (1 of 4) PTHR33264:SF5 - EXPRESSED PROTEIN-RELATED Genomic Order:  1
Name:  ? AL172U10020 Secondary Identifier:  ? PAC:35947586
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL172U10020 0.5kb upstream 0.5kb upstream 1063   true scaffold_172: 12146-13208 Arabidopsis lyrata
AL172U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_172: 12146-12645 Arabidopsis lyrata
AL172U10020 0.5kb downstream 0.5kb downstream 1063   true scaffold_172: 12646-13708 Arabidopsis lyrata
AL172U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_172: 13209-13708 Arabidopsis lyrata
AL172U10020 1.0kb upstream 1.0kb upstream 1563   true scaffold_172: 11646-13208 Arabidopsis lyrata
AL172U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_172: 11646-12645 Arabidopsis lyrata
AL172U10020 1.0kb downstream 1.0kb downstream 1563   true scaffold_172: 12646-14208 Arabidopsis lyrata
AL172U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_172: 13209-14208 Arabidopsis lyrata
AL172U10020 2.0kb upstream 2.0kb upstream 2563   true scaffold_172: 10646-13208 Arabidopsis lyrata
AL172U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_172: 10646-12645 Arabidopsis lyrata
AL172U10020 2.0kb downstream 2.0kb downstream 2496   true scaffold_172: 12646-15141 Arabidopsis lyrata
AL172U10020 2.0kb downstream 2.0kb downstream 1933   false scaffold_172: 13209-15141 Arabidopsis lyrata
AL172U10020 5.0kb upstream 5.0kb upstream 5563   true scaffold_172: 7646-13208 Arabidopsis lyrata
AL172U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_172: 7646-12645 Arabidopsis lyrata
AL172U10020 5.0kb downstream 5.0kb downstream 2496   true scaffold_172: 12646-15141 Arabidopsis lyrata
AL172U10020 5.0kb downstream 5.0kb downstream 1933   false scaffold_172: 13209-15141 Arabidopsis lyrata
AL172U10020 10.0kb upstream 10.0kb upstream 10563   true scaffold_172: 2646-13208 Arabidopsis lyrata
AL172U10020 10.0kb upstream 10.0kb upstream 10000   false scaffold_172: 2646-12645 Arabidopsis lyrata
AL172U10020 10.0kb downstream 10.0kb downstream 2496   true scaffold_172: 12646-15141 Arabidopsis lyrata
AL172U10020 10.0kb downstream 10.0kb downstream 1933   false scaffold_172: 13209-15141 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379936 5261 Brassicaceae View MSA
123832459 5264 Brassicales-Malvales View MSA
124345353 5266 SBM View MSA
124247277 5268 Malvidae View MSA
124063253 5270 Rosid View MSA
123746370 5271 Pentapetalae View MSA
122792575 5272 Eudicot View MSA
122043918 5273 Angiosperm View MSA
121310210 5274 Embryophyte View MSA
123347762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain