Gene : AL163U10020 A. lyrata v2.1
Defline:  (1 of 5) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  2
Name:  ? AL163U10020 Secondary Identifier:  ? PAC:35925438
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL163U10020 0.5kb upstream 0.5kb upstream 1452   true scaffold_163: 7480-8931 Arabidopsis lyrata
AL163U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_163: 8432-8931 Arabidopsis lyrata
AL163U10020 0.5kb downstream 0.5kb downstream 1452   true scaffold_163: 6980-8431 Arabidopsis lyrata
AL163U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_163: 6980-7479 Arabidopsis lyrata
AL163U10020 1.0kb upstream 1.0kb upstream 1952   true scaffold_163: 7480-9431 Arabidopsis lyrata
AL163U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_163: 8432-9431 Arabidopsis lyrata
AL163U10020 1.0kb downstream 1.0kb downstream 1952   true scaffold_163: 6480-8431 Arabidopsis lyrata
AL163U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_163: 6480-7479 Arabidopsis lyrata
AL163U10020 2.0kb upstream 2.0kb upstream 2952   true scaffold_163: 7480-10431 Arabidopsis lyrata
AL163U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_163: 8432-10431 Arabidopsis lyrata
AL163U10020 2.0kb downstream 2.0kb downstream 2952   true scaffold_163: 5480-8431 Arabidopsis lyrata
AL163U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_163: 5480-7479 Arabidopsis lyrata
AL163U10020 5.0kb upstream 5.0kb upstream 5952   true scaffold_163: 7480-13431 Arabidopsis lyrata
AL163U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_163: 8432-13431 Arabidopsis lyrata
AL163U10020 5.0kb downstream 5.0kb downstream 5952   true scaffold_163: 2480-8431 Arabidopsis lyrata
AL163U10020 5.0kb downstream 5.0kb downstream 5000   false scaffold_163: 2480-7479 Arabidopsis lyrata
AL163U10020 10.0kb upstream 10.0kb upstream 8492   true scaffold_163: 7480-15971 Arabidopsis lyrata
AL163U10020 10.0kb upstream 10.0kb upstream 7540   false scaffold_163: 8432-15971 Arabidopsis lyrata
AL163U10020 10.0kb downstream 10.0kb downstream 8431   true scaffold_163: 1-8431 Arabidopsis lyrata
AL163U10020 10.0kb downstream 10.0kb downstream 7479   false scaffold_163: 1-7479 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365387 5261 Brassicaceae View MSA
123829721 5264 Brassicales-Malvales View MSA
124351624 5266 SBM View MSA
124253434 5268 Malvidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain