Gene : AL113U10020 A. lyrata v2.1

Defline:  (1 of 2) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? AL113U10020 Secondary Identifier:  ? PAC:35921754

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL113U10020 0.5kb upstream 0.5kb upstream 2593   true scaffold_113: 4776-7368 Arabidopsis lyrata
AL113U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_113: 4776-5275 Arabidopsis lyrata
AL113U10020 0.5kb downstream 0.5kb downstream 2593   true scaffold_113: 5276-7868 Arabidopsis lyrata
AL113U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_113: 7369-7868 Arabidopsis lyrata
AL113U10020 1.0kb upstream 1.0kb upstream 3093   true scaffold_113: 4276-7368 Arabidopsis lyrata
AL113U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_113: 4276-5275 Arabidopsis lyrata
AL113U10020 1.0kb downstream 1.0kb downstream 3093   true scaffold_113: 5276-8368 Arabidopsis lyrata
AL113U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_113: 7369-8368 Arabidopsis lyrata
AL113U10020 2.0kb upstream 2.0kb upstream 4093   true scaffold_113: 3276-7368 Arabidopsis lyrata
AL113U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_113: 3276-5275 Arabidopsis lyrata
AL113U10020 2.0kb downstream 2.0kb downstream 4093   true scaffold_113: 5276-9368 Arabidopsis lyrata
AL113U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_113: 7369-9368 Arabidopsis lyrata
AL113U10020 5.0kb upstream 5.0kb upstream 7093   true scaffold_113: 276-7368 Arabidopsis lyrata
AL113U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_113: 276-5275 Arabidopsis lyrata
AL113U10020 5.0kb downstream 5.0kb downstream 7093   true scaffold_113: 5276-12368 Arabidopsis lyrata
AL113U10020 5.0kb downstream 5.0kb downstream 5000   false scaffold_113: 7369-12368 Arabidopsis lyrata
AL113U10020 10.0kb upstream 10.0kb upstream 7368   true scaffold_113: 1-7368 Arabidopsis lyrata
AL113U10020 10.0kb upstream 10.0kb upstream 5275   false scaffold_113: 1-5275 Arabidopsis lyrata
AL113U10020 10.0kb downstream 10.0kb downstream 12093   true scaffold_113: 5276-17368 Arabidopsis lyrata
AL113U10020 10.0kb downstream 10.0kb downstream 10000   false scaffold_113: 7369-17368 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361918 5261 Brassicaceae View MSA
123840908 5264 Brassicales-Malvales View MSA
124350901 5266 SBM View MSA
124246593 5268 Malvidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain