Gene : AL1032U10010 A. lyrata v2.1

Defline:  (1 of 5) 1.14.11.15 - Gibberellin 3-beta-dioxygenase / Gibberellin 3-beta-hydroxylase Genomic Order:  1
Name:  ? AL1032U10010 Secondary Identifier:  ? PAC:35930144

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5035 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1032U10010 0.5kb upstream 0.5kb upstream 1019   true scaffold_1032: 243-1261 Arabidopsis lyrata
AL1032U10010 0.5kb upstream 0.5kb upstream 500   false scaffold_1032: 762-1261 Arabidopsis lyrata
AL1032U10010 0.5kb downstream 0.5kb downstream 761   true scaffold_1032: 1-761 Arabidopsis lyrata
AL1032U10010 0.5kb downstream 0.5kb downstream 242   false scaffold_1032: 1-242 Arabidopsis lyrata
AL1032U10010 1.0kb upstream 1.0kb upstream 1519   true scaffold_1032: 243-1761 Arabidopsis lyrata
AL1032U10010 1.0kb upstream 1.0kb upstream 1000   false scaffold_1032: 762-1761 Arabidopsis lyrata
AL1032U10010 1.0kb downstream 1.0kb downstream 761   true scaffold_1032: 1-761 Arabidopsis lyrata
AL1032U10010 1.0kb downstream 1.0kb downstream 242   false scaffold_1032: 1-242 Arabidopsis lyrata
AL1032U10010 2.0kb upstream 2.0kb upstream 2519   true scaffold_1032: 243-2761 Arabidopsis lyrata
AL1032U10010 2.0kb upstream 2.0kb upstream 2000   false scaffold_1032: 762-2761 Arabidopsis lyrata
AL1032U10010 2.0kb downstream 2.0kb downstream 761   true scaffold_1032: 1-761 Arabidopsis lyrata
AL1032U10010 2.0kb downstream 2.0kb downstream 242   false scaffold_1032: 1-242 Arabidopsis lyrata
AL1032U10010 5.0kb upstream 5.0kb upstream 3137   true scaffold_1032: 243-3379 Arabidopsis lyrata
AL1032U10010 5.0kb upstream 5.0kb upstream 2618   false scaffold_1032: 762-3379 Arabidopsis lyrata
AL1032U10010 5.0kb downstream 5.0kb downstream 761   true scaffold_1032: 1-761 Arabidopsis lyrata
AL1032U10010 5.0kb downstream 5.0kb downstream 242   false scaffold_1032: 1-242 Arabidopsis lyrata
AL1032U10010 10.0kb upstream 10.0kb upstream 3137   true scaffold_1032: 243-3379 Arabidopsis lyrata
AL1032U10010 10.0kb upstream 10.0kb upstream 2618   false scaffold_1032: 762-3379 Arabidopsis lyrata
AL1032U10010 10.0kb downstream 10.0kb downstream 761   true scaffold_1032: 1-761 Arabidopsis lyrata
AL1032U10010 10.0kb downstream 10.0kb downstream 242   false scaffold_1032: 1-242 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122323995 5261 Brassicaceae Singleton cluster - no MSA
123765537 5264 Brassicales-Malvales Singleton cluster - no MSA
124341601 5266 SBM View MSA
124249437 5268 Malvidae View MSA
124074813 5270 Rosid View MSA
123753452 5271 Pentapetalae View MSA
122787125 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain