Gene : AL108U10020 A. lyrata v2.1

Defline:  (1 of 2) K03844 - alpha-1,2-mannosyltransferase (ALG11) Genomic Order:  2
Name:  ? AL108U10020 Secondary Identifier:  ? PAC:35935828

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL108U10020 0.5kb upstream 0.5kb upstream 4953   true scaffold_108: 10979-15931 Arabidopsis lyrata
AL108U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_108: 15432-15931 Arabidopsis lyrata
AL108U10020 0.5kb downstream 0.5kb downstream 4953   true scaffold_108: 10479-15431 Arabidopsis lyrata
AL108U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_108: 10479-10978 Arabidopsis lyrata
AL108U10020 1.0kb upstream 1.0kb upstream 5453   true scaffold_108: 10979-16431 Arabidopsis lyrata
AL108U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_108: 15432-16431 Arabidopsis lyrata
AL108U10020 1.0kb downstream 1.0kb downstream 5453   true scaffold_108: 9979-15431 Arabidopsis lyrata
AL108U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_108: 9979-10978 Arabidopsis lyrata
AL108U10020 2.0kb upstream 2.0kb upstream 6453   true scaffold_108: 10979-17431 Arabidopsis lyrata
AL108U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_108: 15432-17431 Arabidopsis lyrata
AL108U10020 2.0kb downstream 2.0kb downstream 6453   true scaffold_108: 8979-15431 Arabidopsis lyrata
AL108U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_108: 8979-10978 Arabidopsis lyrata
AL108U10020 5.0kb upstream 5.0kb upstream 9453   true scaffold_108: 10979-20431 Arabidopsis lyrata
AL108U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_108: 15432-20431 Arabidopsis lyrata
AL108U10020 5.0kb downstream 5.0kb downstream 9453   true scaffold_108: 5979-15431 Arabidopsis lyrata
AL108U10020 5.0kb downstream 5.0kb downstream 5000   false scaffold_108: 5979-10978 Arabidopsis lyrata
AL108U10020 10.0kb upstream 10.0kb upstream 9809   true scaffold_108: 10979-20787 Arabidopsis lyrata
AL108U10020 10.0kb upstream 10.0kb upstream 5356   false scaffold_108: 15432-20787 Arabidopsis lyrata
AL108U10020 10.0kb downstream 10.0kb downstream 14453   true scaffold_108: 979-15431 Arabidopsis lyrata
AL108U10020 10.0kb downstream 10.0kb downstream 10000   false scaffold_108: 979-10978 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327077 5261 Brassicaceae View MSA
123768519 5264 Brassicales-Malvales View MSA
124267103 5266 SBM View MSA
124123440 5268 Malvidae View MSA
123852567 5270 Rosid View MSA
123741917 5271 Pentapetalae View MSA
122794409 5272 Eudicot View MSA
122048989 5273 Angiosperm View MSA
121348193 5274 Embryophyte View MSA
123425539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain