Gene : AL1G66480 A. lyrata v2.1

Defline:  (1 of 1) K12398 - AP-3 complex subunit mu (AP3M) Genomic Order:  5161
Name:  ? AL1G66480 Secondary Identifier:  ? PAC:35930876

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G66480 0.5kb upstream 0.5kb upstream 3305   true scaffold_1: 32577278-32580582 Arabidopsis lyrata
AL1G66480 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 32580083-32580582 Arabidopsis lyrata
AL1G66480 0.5kb downstream 0.5kb downstream 3305   true scaffold_1: 32576778-32580082 Arabidopsis lyrata
AL1G66480 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 32576778-32577277 Arabidopsis lyrata
AL1G66480 1.0kb upstream 1.0kb upstream 3805   true scaffold_1: 32577278-32581082 Arabidopsis lyrata
AL1G66480 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 32580083-32581082 Arabidopsis lyrata
AL1G66480 1.0kb downstream 1.0kb downstream 3805   true scaffold_1: 32576278-32580082 Arabidopsis lyrata
AL1G66480 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 32576278-32577277 Arabidopsis lyrata
AL1G66480 2.0kb upstream 2.0kb upstream 4805   true scaffold_1: 32577278-32582082 Arabidopsis lyrata
AL1G66480 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 32580083-32582082 Arabidopsis lyrata
AL1G66480 2.0kb downstream 2.0kb downstream 4805   true scaffold_1: 32575278-32580082 Arabidopsis lyrata
AL1G66480 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 32575278-32577277 Arabidopsis lyrata
AL1G66480 5.0kb upstream 5.0kb upstream 7805   true scaffold_1: 32577278-32585082 Arabidopsis lyrata
AL1G66480 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 32580083-32585082 Arabidopsis lyrata
AL1G66480 5.0kb downstream 5.0kb downstream 7805   true scaffold_1: 32572278-32580082 Arabidopsis lyrata
AL1G66480 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 32572278-32577277 Arabidopsis lyrata
AL1G66480 10.0kb upstream 10.0kb upstream 12805   true scaffold_1: 32577278-32590082 Arabidopsis lyrata
AL1G66480 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 32580083-32590082 Arabidopsis lyrata
AL1G66480 10.0kb downstream 10.0kb downstream 12805   true scaffold_1: 32567278-32580082 Arabidopsis lyrata
AL1G66480 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 32567278-32577277 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366603 5261 Brassicaceae View MSA
123834742 5264 Brassicales-Malvales View MSA
124337517 5266 SBM View MSA
124239275 5268 Malvidae View MSA
124067880 5270 Rosid View MSA
123739903 5271 Pentapetalae View MSA
122788597 5272 Eudicot View MSA
122044691 5273 Angiosperm View MSA
121345479 5274 Embryophyte View MSA
123425164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain