Gene : AL1G66670 A. lyrata v2.1

Defline:  (1 of 1) PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  5176
Name:  ? AL1G66670 Secondary Identifier:  ? PAC:35933972

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G66670 0.5kb upstream 0.5kb upstream 2424   true scaffold_1: 32774068-32776491 Arabidopsis lyrata
AL1G66670 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 32775992-32776491 Arabidopsis lyrata
AL1G66670 0.5kb downstream 0.5kb downstream 2424   true scaffold_1: 32773568-32775991 Arabidopsis lyrata
AL1G66670 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 32773568-32774067 Arabidopsis lyrata
AL1G66670 1.0kb upstream 1.0kb upstream 2924   true scaffold_1: 32774068-32776991 Arabidopsis lyrata
AL1G66670 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 32775992-32776991 Arabidopsis lyrata
AL1G66670 1.0kb downstream 1.0kb downstream 2924   true scaffold_1: 32773068-32775991 Arabidopsis lyrata
AL1G66670 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 32773068-32774067 Arabidopsis lyrata
AL1G66670 2.0kb upstream 2.0kb upstream 3924   true scaffold_1: 32774068-32777991 Arabidopsis lyrata
AL1G66670 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 32775992-32777991 Arabidopsis lyrata
AL1G66670 2.0kb downstream 2.0kb downstream 3924   true scaffold_1: 32772068-32775991 Arabidopsis lyrata
AL1G66670 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 32772068-32774067 Arabidopsis lyrata
AL1G66670 5.0kb upstream 5.0kb upstream 6924   true scaffold_1: 32774068-32780991 Arabidopsis lyrata
AL1G66670 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 32775992-32780991 Arabidopsis lyrata
AL1G66670 5.0kb downstream 5.0kb downstream 6924   true scaffold_1: 32769068-32775991 Arabidopsis lyrata
AL1G66670 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 32769068-32774067 Arabidopsis lyrata
AL1G66670 10.0kb upstream 10.0kb upstream 11924   true scaffold_1: 32774068-32785991 Arabidopsis lyrata
AL1G66670 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 32775992-32785991 Arabidopsis lyrata
AL1G66670 10.0kb downstream 10.0kb downstream 11924   true scaffold_1: 32764068-32775991 Arabidopsis lyrata
AL1G66670 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 32764068-32774067 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363483 5261 Brassicaceae View MSA
123840390 5264 Brassicales-Malvales View MSA
124322712 5266 SBM View MSA
124250647 5268 Malvidae View MSA
124071309 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain