Gene : AL1G65540 A. lyrata v2.1

Defline:  (1 of 1) PTHR10992:SF773 - PROTEIN AUXIN RESPONSE 4 Genomic Order:  5082
Name:  ? AL1G65540 Secondary Identifier:  ? PAC:35932857

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G65540 0.5kb upstream 0.5kb upstream 3507   true scaffold_1: 31425483-31428989 Arabidopsis lyrata
AL1G65540 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 31425483-31425982 Arabidopsis lyrata
AL1G65540 0.5kb downstream 0.5kb downstream 3507   true scaffold_1: 31425983-31429489 Arabidopsis lyrata
AL1G65540 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 31428990-31429489 Arabidopsis lyrata
AL1G65540 1.0kb upstream 1.0kb upstream 4007   true scaffold_1: 31424983-31428989 Arabidopsis lyrata
AL1G65540 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 31424983-31425982 Arabidopsis lyrata
AL1G65540 1.0kb downstream 1.0kb downstream 4007   true scaffold_1: 31425983-31429989 Arabidopsis lyrata
AL1G65540 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 31428990-31429989 Arabidopsis lyrata
AL1G65540 2.0kb upstream 2.0kb upstream 5007   true scaffold_1: 31423983-31428989 Arabidopsis lyrata
AL1G65540 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 31423983-31425982 Arabidopsis lyrata
AL1G65540 2.0kb downstream 2.0kb downstream 5007   true scaffold_1: 31425983-31430989 Arabidopsis lyrata
AL1G65540 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 31428990-31430989 Arabidopsis lyrata
AL1G65540 5.0kb upstream 5.0kb upstream 8007   true scaffold_1: 31420983-31428989 Arabidopsis lyrata
AL1G65540 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 31420983-31425982 Arabidopsis lyrata
AL1G65540 5.0kb downstream 5.0kb downstream 8007   true scaffold_1: 31425983-31433989 Arabidopsis lyrata
AL1G65540 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 31428990-31433989 Arabidopsis lyrata
AL1G65540 10.0kb upstream 10.0kb upstream 13007   true scaffold_1: 31415983-31428989 Arabidopsis lyrata
AL1G65540 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 31415983-31425982 Arabidopsis lyrata
AL1G65540 10.0kb downstream 10.0kb downstream 13007   true scaffold_1: 31425983-31438989 Arabidopsis lyrata
AL1G65540 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 31428990-31438989 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363489 5261 Brassicaceae View MSA
123834239 5264 Brassicales-Malvales View MSA
124341692 5266 SBM View MSA
124240695 5268 Malvidae View MSA
124064720 5270 Rosid View MSA
123737240 5271 Pentapetalae View MSA
122791841 5272 Eudicot View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain