Gene : AL2G12170 A. lyrata v2.1

Defline:  (1 of 2) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) Genomic Order:  199
Name:  ? AL2G12170 Secondary Identifier:  ? PAC:35945138

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G12170 0.5kb upstream 0.5kb upstream 5228   true scaffold_2: 1076360-1081587 Arabidopsis lyrata
AL2G12170 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 1081088-1081587 Arabidopsis lyrata
AL2G12170 0.5kb downstream 0.5kb downstream 5228   true scaffold_2: 1075860-1081087 Arabidopsis lyrata
AL2G12170 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 1075860-1076359 Arabidopsis lyrata
AL2G12170 1.0kb upstream 1.0kb upstream 5728   true scaffold_2: 1076360-1082087 Arabidopsis lyrata
AL2G12170 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 1081088-1082087 Arabidopsis lyrata
AL2G12170 1.0kb downstream 1.0kb downstream 5728   true scaffold_2: 1075360-1081087 Arabidopsis lyrata
AL2G12170 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 1075360-1076359 Arabidopsis lyrata
AL2G12170 2.0kb upstream 2.0kb upstream 6728   true scaffold_2: 1076360-1083087 Arabidopsis lyrata
AL2G12170 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 1081088-1083087 Arabidopsis lyrata
AL2G12170 2.0kb downstream 2.0kb downstream 6728   true scaffold_2: 1074360-1081087 Arabidopsis lyrata
AL2G12170 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 1074360-1076359 Arabidopsis lyrata
AL2G12170 5.0kb upstream 5.0kb upstream 9728   true scaffold_2: 1076360-1086087 Arabidopsis lyrata
AL2G12170 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 1081088-1086087 Arabidopsis lyrata
AL2G12170 5.0kb downstream 5.0kb downstream 9728   true scaffold_2: 1071360-1081087 Arabidopsis lyrata
AL2G12170 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 1071360-1076359 Arabidopsis lyrata
AL2G12170 10.0kb upstream 10.0kb upstream 14728   true scaffold_2: 1076360-1091087 Arabidopsis lyrata
AL2G12170 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 1081088-1091087 Arabidopsis lyrata
AL2G12170 10.0kb downstream 10.0kb downstream 14728   true scaffold_2: 1066360-1081087 Arabidopsis lyrata
AL2G12170 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 1066360-1076359 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502745 5273 Angiosperm View MSA
122343546 5261 Brassicaceae View MSA
123783714 5264 Brassicales-Malvales View MSA
124281931 5266 SBM View MSA
124136603 5268 Malvidae View MSA
123864439 5270 Rosid View MSA
123449747 5271 Pentapetalae View MSA
122485277 5272 Eudicot View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain